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Report for CCDS660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
660.1 Public Homo sapiens 1 ZRANB2 24 110 108 CCDS HistoryNCBI Gene:9406Re-query CCDS DB by CCDS ID:660.1Re-query CCDS DB by GeneID:9406See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 660.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254821.10 ENSP00000254821.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000254821.10Link to Ensembl Protein Viewer:ENSP00000254821.6Re-query CCDS DB by Nucleotide ID:ENST00000254821Re-query CCDS DB by Protein ID:ENSP00000254821
Original member Current member EBI ENST00000611683.1 ENSP00000482026.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611683.1Link to Ensembl Protein Viewer:ENSP00000482026.1Re-query CCDS DB by Nucleotide ID:ENST00000611683Re-query CCDS DB by Protein ID:ENSP00000482026
Original member Current member NCBI NM_005455.5 NP_005446.2 Accepted alive Link to Nucleotide Sequence:NM_005455.5Link to Protein Sequence:NP_005446.2Re-query CCDS DB by Nucleotide ID:NM_005455Re-query CCDS DB by Protein ID:NP_005446Link to BLAST:NP_005446.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005446.2 320 O95218-2 320 100% 0 0

Chromosomal Locations for CCDS 660.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 71065719 71065752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 71066776 71066934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 71069276 71069362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 71070827 71070996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 71072121 71072255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 71072472 71072548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 71076795 71076877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 71078457 71078565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 71078656 71078708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 71080940 71080995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGTCGACCAAGAATTTCCGAGTCAGTGACGGGGACTGGATTTGCCCTGACAAAAAATGTGGAAATGTAA
ACTTTGCTAGAAGAACCAGCTGTAATCGATGTGGTCGGGAGAAAACAACTGAGGCCAAGATGATGAAAGC
TGGGGGCACTGAAATAGGAAAGACACTTGCAGAAAAGAGCCGAGGCCTATTTAGTGCTAATGACTGGCAA
TGTAAAACTTGCAGCAATGTGAATTGGGCCAGAAGATCAGAGTGTAATATGTGTAATACTCCAAAGTATG
CTAAATTAGAAGAAAGAACAGGATATGGTGGTGGTTTTAATGAAAGAGAAAATGTTGAATATATAGAAAG
AGAAGAATCTGATGGTGAATATGATGAGTTTGGACGTAAAAAGAAAAAATACAGAGGGAAAGCAGTTGGT
CCTGCATCTATATTAAAGGAAGTTGAAGATAAAGAATCAGAGGGAGAAGAAGAGGATGAGGATGAAGATC
TTTCTAAATATAAGTTAGATGAGGATGAGGATGAAGATGACGCTGATCTCTCAAAATATAATCTTGATGC
CAGTGAAGAAGAAGATAGTAATAAAAAGAAATCTAATAGACGAAGTCGCTCAAAGTCTCGATCTTCACAT
TCACGATCTTCATCACGCTCATCCTCCCCCTCAAGTTCAAGGTCTAGGTCCAGGTCCCGTTCAAGAAGTT
CTTCCAGTTCGCAGTCAAGATCTCGTTCCAGTTCCAGAGAACGTTCGAGATCTCGTGGGTCGAAATCAAG
ATCCAGCTCCAGGTCCCACAGGGGCTCTTCTTCCCCACGAAAAAGATCTTATTCAAGTTCATCATCTTCT
CCTGAGAGGAACAGAAAGAGAAGTCGTTCTAGATCTTCTTCATCTGGTGATCGCAAAAAAAGACGAACAA
GATCACGGTCACCCGAAAGCCAGGTGATTGGTGAAAACACTAAACAACCCTGA

Translation (320 aa):
MSTKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQ
CKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREESDGEYDEFGRKKKKYRGKAVG
PASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSH
SRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSS
PERNRKRSRSRSSSSGDRKKRRTRSRSPESQVIGENTKQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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