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Report for CCDS66021.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66021.1 Public Homo sapiens 11 TMEM9B 24 110 108 CCDS HistoryNCBI Gene:56674Re-query CCDS DB by CCDS ID:66021.1Re-query CCDS DB by GeneID:56674See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66021.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309134.9 ENSP00000311842.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000309134.9Link to Ensembl Protein Viewer:ENSP00000311842.5Re-query CCDS DB by Nucleotide ID:ENST00000309134Re-query CCDS DB by Protein ID:ENSP00000311842
Original member Current member EBI ENST00000525069.5 ENSP00000431487.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000525069.5Link to Ensembl Protein Viewer:ENSP00000431487.1Re-query CCDS DB by Nucleotide ID:ENST00000525069Re-query CCDS DB by Protein ID:ENSP00000431487
Original member Current member NCBI NM_001286094.2 NP_001273023.1 Accepted alive Link to Nucleotide Sequence:NM_001286094.2Link to Protein Sequence:NP_001273023.1Re-query CCDS DB by Nucleotide ID:NM_001286094Re-query CCDS DB by Protein ID:NP_001273023Link to BLAST:NP_001273023.1
Original member Current member NCBI NM_001286095.2 NP_001273024.1 Accepted alive Link to Nucleotide Sequence:NM_001286095.2Link to Protein Sequence:NP_001273024.1Re-query CCDS DB by Nucleotide ID:NM_001286095Re-query CCDS DB by Protein ID:NP_001273024Link to BLAST:NP_001273024.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273023.1 124 Q9NQ34-2 124 100% 0 0
NP_001273024.1 124 Q9NQ34-2 124 100% 0 0

Chromosomal Locations for CCDS 66021.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 8948320 8948475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8953203 8953337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8956190 8956273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (375 nt):
ATGCCTGTGCGGGGGCCTGATGTAGAAGCATACTGTCTACGCTGTGAATGCAAATATGAAGAAAGAAGCT
CTGTCACAATCAAGGTTACCATTATAATTTATCTCTCCATTTTGGGCCTTCTACTTCTGTACATGGTATA
TCTTACTCTGGTTGAGCCCATACTGAAGAGGCGCCTCTTTGGACATGCACAGTTGATACAGAGTGATGAT
GATATTGGGGATCACCAGCCTTTTGCAAATGCACACGATGTGCTAGCCCGCTCCCGCAGTCGAGCCAACG
TGCTGAACAAGGTAGAATATGCACAGCAGCGCTGGAAGCTTCAAGTCCAAGAGCAGCGAAAGTCTGTCTT
TGACCGGCATGTTGTCCTCAGCTAA

Translation (124 aa):
MPVRGPDVEAYCLRCECKYEERSSVTIKVTIIIYLSILGLLLLYMVYLTLVEPILKRRLFGHAQLIQSDD
DIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWKLQVQEQRKSVFDRHVVLS


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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