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Report for CCDS66113.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66113.1 Public Homo sapiens 11 TRMT112 24 110 108 CCDS HistoryNCBI Gene:51504Re-query CCDS DB by CCDS ID:66113.1Re-query CCDS DB by GeneID:51504See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66113.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308774.6 ENSP00000309433.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000308774.6Link to Ensembl Protein Viewer:ENSP00000309433.2Re-query CCDS DB by Nucleotide ID:ENST00000308774Re-query CCDS DB by Protein ID:ENSP00000309433
Original member Current member NCBI NM_001286082.2 NP_001273011.1 Accepted alive Link to Nucleotide Sequence:NM_001286082.2Link to Protein Sequence:NP_001273011.1Re-query CCDS DB by Nucleotide ID:NM_001286082Re-query CCDS DB by Protein ID:NP_001273011Link to BLAST:NP_001273011.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273011.1 120 Q9UI30-2 120 100% 0 0

Chromosomal Locations for CCDS 66113.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64316861 64316968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64317058 64317132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64317264 64317365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64317449 64317526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (363 nt):
ATGAAACTGCTTACCCACAATCTGCTGAGCTCGCATGTGCGGGGGGTGGGGTCCCGTGGCTTCCCCCTGC
GCCTCCAGGCCACCGAGGTCCGTATCTGCCCTGTGGAATTCAACCCCAACTTCGTGGCGCGTATGATACC
TAAAGTGGAGTGGTCGGCGTTCCTGGAGGCGGCCGATAACGTGCCGAAAGGGCCGGTTGAGGGATATGAG
GAGAATGAGGAGTTTCTGAGGACCATGCACCACCTGCTGCTGGAGGTGGAAGTGATAGAGGGCACCCTGC
AGTGCCCGGAATCTGGACGTATGTTCCCCATCAGCCGCGGGATCCCCAACATGCTGCTGAGTGAAGAGGA
AACTGAGAGTTGA

Translation (120 aa):
MKLLTHNLLSSHVRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNVPKGPVEGYE
ENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLLSEEETES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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