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Report for CCDS66470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66470.1 Public Homo sapiens 12 CCDC63 24 110 108 CCDS HistoryNCBI Gene:160762Re-query CCDS DB by CCDS ID:66470.1Re-query CCDS DB by GeneID:160762See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66470.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000545036.5 ENSP00000445881.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545036.5Link to Ensembl Protein Viewer:ENSP00000445881.1Re-query CCDS DB by Nucleotide ID:ENST00000545036Re-query CCDS DB by Protein ID:ENSP00000445881
Original member Current member NCBI NM_001286243.2 NP_001273172.1 Accepted alive Link to Nucleotide Sequence:NM_001286243.2Link to Protein Sequence:NP_001273172.1Re-query CCDS DB by Nucleotide ID:NM_001286243Re-query CCDS DB by Protein ID:NP_001273172Link to BLAST:NP_001273172.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273172.1 523 Q8NA47-2 523 100% 0 0

Chromosomal Locations for CCDS 66470.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 110853516 110853574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110858586 110858775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110873842 110873961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110879906 110880087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110881115 110881296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110884030 110884250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110893076 110893150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110898933 110899125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110904588 110904791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110907331 110907476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1572 nt):
ATGGTGGAAAGCCGGAAGTCTTTTAAGTTCCGAAACCAGCAGAAGATTGCGAGTCAGTACAAGGAGATCA
AGACCCTGAAGACAGAGCAGGATGAGATCACCCTACTGTTGAGTCTCATGAAATCCTCGAGGAACATGAA
TCGGAGTGAGAAGAACTACATGGAGCTGCGACTCCTGCTCCAAACTAAGGAGGACTATGAGGCATTGATT
AAATCCCTGAAAGTGCTGTTGGCTGAACTGGATGAGAAGATTCTTCAGATGGAAAAAAAAATCGCAAACC
AAAAACAGATTTTCGCAAAAATGCAGGAGGCCAATAACCCCCGGAAACTGCAGAAACAGATTCACATTTT
GGAAACCCGTTTGAATCTCGTCACTGTTCACTTTGACAAGATGCTGACCACTAATGCCAAGCTCCGGAAG
GAGATTGAAGACCTACGATTTGAGAAGGCTGCTTATGACAATGTCTACCAGCAGCTCCAGCACTGCCTGT
TGATGGAGAAGAAAACCATGAACTTGGCCATTGAGCAATCTTCTCAGGCCTATGAGCAGAGGGTGGAGGC
CATGGCTCGAATGGCTGCCATGAAAGACCGCCAGAAGAAGGACACCTCTCAGTACAACCTGGAGATCCGA
GAGCTGGAGCGTCTCTATGCCCATGAGAGCAAGCTCAAGTCCTTCCTGCTCGTCAAGCTGAATGATCGCA
ATGAATTCGAGGAGCAGGCCAAAAGGGAGGAAGCTCTCAAGGCAAAGAAGCATGTCAAGAAGAACAGGGG
AGAGAGTTTTGAGAGCTATGAGGTGGCCCACCTCCGGCTGCTGAAGCTGGCTGAGAGTGGGAACCTAAAC
CAGCTCATTGAAGATTTTCTGGCCAAGGAGGAGAAGAATTTTGCTCGGTTCACGTATGTCACGGAGCTCA
ACAACGACATGGAGATGATGCACAAGAGGACCCAACGAATCCAGGACGAGATCATCCTCTTGCGATCCCA
GCAGAAATTGTCCCACGATGACAACCACTCTGTCCTGAGACAGCTGGAGGATAAACTGAGGAAGACCACG
GAGGAGGCAGATATGTATGAGAGCAAGTACGGGGAGGTCAGCAAGACCTTGGATCTATTGAAGAACTCAG
TGGAGAAACTGTTCAAGAAGATAAACTGTGACGCCACCAAGATCCTGGTGCAGTTAGGGGAGACGGGGAA
AGTCACTGACATCAACCTTCCGCAGTATTTTGCCATCATTGAAAAGAAGACCAACGACCTGCTGCTGTTG
GAGACCTACAGGCGCATCCTGGAAGTGGAAGGGGCAGAGGCTGAGATCCCGCCACCCTTCATCAACCCTT
TCTGGGGTGGCTCTGCCCTCCTCAAGCCCCCAGAACCCATCAAAGTCATCCCCCCAGTGCTGGGGGCTGA
CCCCTTCAGCGACAGGTTGGATGATGTGGAACAGCCCCTGGACCACAGCAGCCTTCGGCAGCTGGTTCTC
GACAATTATATCCTGAAGGAGAATCGGAGTAAGGAAGTGCGCGGAGACAGCCTGCCTGAGAAGGTGGATG
ACTTCAGATCCAGGAAGAAAGTAACCATGTGA

Translation (523 aa):
MVESRKSFKFRNQQKIASQYKEIKTLKTEQDEITLLLSLMKSSRNMNRSEKNYMELRLLLQTKEDYEALI
KSLKVLLAELDEKILQMEKKIANQKQIFAKMQEANNPRKLQKQIHILETRLNLVTVHFDKMLTTNAKLRK
EIEDLRFEKAAYDNVYQQLQHCLLMEKKTMNLAIEQSSQAYEQRVEAMARMAAMKDRQKKDTSQYNLEIR
ELERLYAHESKLKSFLLVKLNDRNEFEEQAKREEALKAKKHVKKNRGESFESYEVAHLRLLKLAESGNLN
QLIEDFLAKEEKNFARFTYVTELNNDMEMMHKRTQRIQDEIILLRSQQKLSHDDNHSVLRQLEDKLRKTT
EEADMYESKYGEVSKTLDLLKNSVEKLFKKINCDATKILVQLGETGKVTDINLPQYFAIIEKKTNDLLLL
ETYRRILEVEGAEAEIPPPFINPFWGGSALLKPPEPIKVIPPVLGADPFSDRLDDVEQPLDHSSLRQLVL
DNYILKENRSKEVRGDSLPEKVDDFRSRKKVTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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