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Report for CCDS66616.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66616.1 Public Homo sapiens 14 NOP9 24 110 108 CCDS HistoryNCBI Gene:161424Re-query CCDS DB by CCDS ID:66616.1Re-query CCDS DB by GeneID:161424See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66616.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396802.7 ENSP00000380020.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396802.7Link to Ensembl Protein Viewer:ENSP00000380020.3Re-query CCDS DB by Nucleotide ID:ENST00000396802Re-query CCDS DB by Protein ID:ENSP00000380020
Original member Current member NCBI NM_001286367.2 NP_001273296.1 Accepted alive Link to Nucleotide Sequence:NM_001286367.2Link to Protein Sequence:NP_001273296.1Re-query CCDS DB by Nucleotide ID:NM_001286367Re-query CCDS DB by Protein ID:NP_001273296Link to BLAST:NP_001273296.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273296.1 535 Q86U38-2 535 100% 0 0

Chromosomal Locations for CCDS 66616.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24299955 24300201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24300408 24300857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24301612 24301722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24301965 24302106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24302232 24302424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24303074 24303214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24303732 24303857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24304041 24304188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24304570 24304598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24304938 24304958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1608 nt):
ATGGGGCAGGGTCCGCGCTCTCCACACAAGGTGGGGCGCCGGTTCCCAGCTGGTGGCAAACGGGGGCGCG
GG
GCCAAGGGGTCGGGGCGCCCCTTACCAGGCCGTAAGCGGCAACCCTGGCCGCCTCCGGATGGGCGCTC
G
GAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGCTCTGGGATATTTCCGCCGGGCGCTGTCA
GCA
TTGAAAGAGGCTCCCGAGACTGGGGAAGAACGAGATCTGATGGTGCACAATATAATGAAGGAAGTAG
AG
ACTCAGGCCCTAGCTTTGTCCACGAACAGGACTGGCAGTGAGATGCTGCAGGAACTGTTGGGATTCAG
T
CCCTTGAAACCGCTTTGTCGCGTGTGGGCTGCTCTGCGCTCTAACTTGCGCACTGTGGCCTGTCACCGA
TGC
GGGGTCCATGTATTACAAAGTGCTTTGCTACAGCTCCCTCGATTGCTGGGGAGTGCTGCAGAGGAGG
AG
GAGGAGGAGGAGGAGGATGGAAAGGATGGTCCCACGGAGACCCTGGAGGAGCTGGTCCTGGGACTAGC
C
GCTGAGGTGTGTGATGATTTTCTTGTCTACTGTGGAGACACACATGGCAGCTTCGTGGTCAGAACTCTG
CTT
CAGGTGTTAGGAGGGACTATTCTGGAGTCTGAGAGAGCCAGGCCCCGTGGTTCCCAATCATCTGAAG
CA
CAGAAGACCCCAGCTCAGGAATGTAAGCCAGCTGATTTTGAAGTCCCTGAAACCTTTTTGAATCGCCT
T
CAGGACCTGAGCTCCTCCTTTCTGAAGGACATTGCAGTGTTTATCACTGATAAGATCTCCAGCTTCTGT
CTT
CAAGTGGCTTTACAGGTTTTACACCGCAAACTTCCCCAGTTTTGCGCTCATCTCTGCAATGCTGTGA
TT
GGCTACCTGAGTACTCGCGGTTCCTCAGTAGATGGCAGTCCCCTACTGCTATTTCTCCGAGATCAGAC
G
AGTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTCTTTGAGGAG
CAC
TTGCAGGGGCAGCTGCAGACCCTGGCTGCACATCCCATTGCCAACTTCCCTTTGCAGCGCTTACTGG
AT
GCAGTCACTACCCCTGAGCTGCTGTCCCCTGTGTTTGAGGAGCTGAGCCCTGTCTTGGAAGCTGTATT
G
GCCCAGGGCCACCCAGGGGTAGTCATTGCCCTGGTGGGGGCCTGTCGCAGAGTTGGGGCCTACCAAGCC
AAG
GTCCTACAGCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCTCATCCCGGCAAGTGGCCTGTGTGC
CT
CTCTTTGCCACTTTGATGGCTTATGAGGTGTACTATGGACTGACGGAGGAGGAGGGGGCAGTGCCTGC
A
GAGCACCAGGTGGCAATGGCCGCAGCCAGAGCCTTGGGGGATGTGACAGTCCTTGGGTCTCTACTGCTC
CAG
CATCTGCTGCACTTCTCCACTCCTGGTCTTGTACTTCGAAGTCTGGGTGCCTTGACGGGACCACAGC
TT
CTGTCCCTTGCCCAAAGGCCCGGAAGGAAATTGCTGCTGAGCTTGGGGAGCAGAACCAGGAGCTGA


Translation (535 aa):
MGQGPRSPHKVGRRFPAGGKRGRGAKGSGRPLPGRKRQPWPPPDGRSEPAPDSHPHLSPEALGYFRRALS
A
LKEAPETGEER
DLMVHNIMKEVETQALALSTNRTGSEMLQELLGFSPLKPLCRVWAALRSNLRTVACHR
C
GVHVLQSALLQLPRLLGSAAEEEEEEEEDGKDGPTETLEELVLGLAAEVCDDFLVYCGDTHGSFVVRTL
L
QVLGGTILESERARPRGSQSS
EAQKTPAQECKPADFEVPETFLNRLQDLSSSFLKDIAVFITDKISSFC
L
QVALQVLHRKLPQFCAHLCNAVIGYLSTRGSSVDG
SPLLLFLRDQTSSRLLEQVLLVLEPPRLQSLFEE
H
LQGQLQTLAAHPIANFPLQRLLDAVTTPEL
LSPVFEELSPVLEAVLAQGHPGVVIALVGACRRVGAYQA
K
VLQLLLE
AFHCAEPSSRQVACVPLFATLMAYEVYYGLTEEEGAVPAEHQVAMAAARALGDVTVLGSLLL
Q
HLLHFSTPGLVLRSLGALTGPQLLSLAQ
RPGRKLLLSLGSRTRS



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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