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Report for CCDS66616.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66616.1 Public Homo sapiens 14 NOP9 24 110 108 CCDS HistoryNCBI Gene:161424Re-query CCDS DB by CCDS ID:66616.1Re-query CCDS DB by GeneID:161424See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66616.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396802.7 ENSP00000380020.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396802.7Link to Ensembl Protein Viewer:ENSP00000380020.3Re-query CCDS DB by Nucleotide ID:ENST00000396802Re-query CCDS DB by Protein ID:ENSP00000380020
Original member Current member NCBI NM_001286367.2 NP_001273296.1 Accepted alive Link to Nucleotide Sequence:NM_001286367.2Link to Protein Sequence:NP_001273296.1Re-query CCDS DB by Nucleotide ID:NM_001286367Re-query CCDS DB by Protein ID:NP_001273296Link to BLAST:NP_001273296.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273296.1 535 Q86U38-2 535 100% 0 0

Chromosomal Locations for CCDS 66616.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24299955 24300201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24300408 24300857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24301612 24301722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24301965 24302106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24302232 24302424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24303074 24303214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24303732 24303857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24304041 24304188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24304570 24304598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24304938 24304958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1608 nt):
ATGGGGCAGGGTCCGCGCTCTCCACACAAGGTGGGGCGCCGGTTCCCAGCTGGTGGCAAACGGGGGCGCG
GGGCCAAGGGGTCGGGGCGCCCCTTACCAGGCCGTAAGCGGCAACCCTGGCCGCCTCCGGATGGGCGCTC
GGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGCTCTGGGATATTTCCGCCGGGCGCTGTCA
GCATTGAAAGAGGCTCCCGAGACTGGGGAAGAACGAGATCTGATGGTGCACAATATAATGAAGGAAGTAG
AGACTCAGGCCCTAGCTTTGTCCACGAACAGGACTGGCAGTGAGATGCTGCAGGAACTGTTGGGATTCAG
TCCCTTGAAACCGCTTTGTCGCGTGTGGGCTGCTCTGCGCTCTAACTTGCGCACTGTGGCCTGTCACCGA
TGCGGGGTCCATGTATTACAAAGTGCTTTGCTACAGCTCCCTCGATTGCTGGGGAGTGCTGCAGAGGAGG
AGGAGGAGGAGGAGGAGGATGGAAAGGATGGTCCCACGGAGACCCTGGAGGAGCTGGTCCTGGGACTAGC
CGCTGAGGTGTGTGATGATTTTCTTGTCTACTGTGGAGACACACATGGCAGCTTCGTGGTCAGAACTCTG
CTTCAGGTGTTAGGAGGGACTATTCTGGAGTCTGAGAGAGCCAGGCCCCGTGGTTCCCAATCATCTGAAG
CACAGAAGACCCCAGCTCAGGAATGTAAGCCAGCTGATTTTGAAGTCCCTGAAACCTTTTTGAATCGCCT
TCAGGACCTGAGCTCCTCCTTTCTGAAGGACATTGCAGTGTTTATCACTGATAAGATCTCCAGCTTCTGT
CTTCAAGTGGCTTTACAGGTTTTACACCGCAAACTTCCCCAGTTTTGCGCTCATCTCTGCAATGCTGTGA
TTGGCTACCTGAGTACTCGCGGTTCCTCAGTAGATGGCAGTCCCCTACTGCTATTTCTCCGAGATCAGAC
GAGTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTCTTTGAGGAG
CACTTGCAGGGGCAGCTGCAGACCCTGGCTGCACATCCCATTGCCAACTTCCCTTTGCAGCGCTTACTGG
ATGCAGTCACTACCCCTGAGCTGCTGTCCCCTGTGTTTGAGGAGCTGAGCCCTGTCTTGGAAGCTGTATT
GGCCCAGGGCCACCCAGGGGTAGTCATTGCCCTGGTGGGGGCCTGTCGCAGAGTTGGGGCCTACCAAGCC
AAGGTCCTACAGCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCTCATCCCGGCAAGTGGCCTGTGTGC
CTCTCTTTGCCACTTTGATGGCTTATGAGGTGTACTATGGACTGACGGAGGAGGAGGGGGCAGTGCCTGC
AGAGCACCAGGTGGCAATGGCCGCAGCCAGAGCCTTGGGGGATGTGACAGTCCTTGGGTCTCTACTGCTC
CAGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTACTTCGAAGTCTGGGTGCCTTGACGGGACCACAGC
TTCTGTCCCTTGCCCAAAGGCCCGGAAGGAAATTGCTGCTGAGCTTGGGGAGCAGAACCAGGAGCTGA

Translation (535 aa):
MGQGPRSPHKVGRRFPAGGKRGRGAKGSGRPLPGRKRQPWPPPDGRSEPAPDSHPHLSPEALGYFRRALS
ALKEAPETGEERDLMVHNIMKEVETQALALSTNRTGSEMLQELLGFSPLKPLCRVWAALRSNLRTVACHR
CGVHVLQSALLQLPRLLGSAAEEEEEEEEDGKDGPTETLEELVLGLAAEVCDDFLVYCGDTHGSFVVRTL
LQVLGGTILESERARPRGSQSSEAQKTPAQECKPADFEVPETFLNRLQDLSSSFLKDIAVFITDKISSFC
LQVALQVLHRKLPQFCAHLCNAVIGYLSTRGSSVDGSPLLLFLRDQTSSRLLEQVLLVLEPPRLQSLFEE
HLQGQLQTLAAHPIANFPLQRLLDAVTTPELLSPVFEELSPVLEAVLAQGHPGVVIALVGACRRVGAYQA
KVLQLLLEAFHCAEPSSRQVACVPLFATLMAYEVYYGLTEEEGAVPAEHQVAMAAARALGDVTVLGSLLL
QHLLHFSTPGLVLRSLGALTGPQLLSLAQRPGRKLLLSLGSRTRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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