NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS66862.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66862.1 Public Homo sapiens 15 WDR93 24 110 108 CCDS HistoryNCBI Gene:56964Re-query CCDS DB by CCDS ID:66862.1Re-query CCDS DB by GeneID:56964See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66862.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000560294.5 ENSP00000453971.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000560294.5Link to Ensembl Protein Viewer:ENSP00000453971.1Re-query CCDS DB by Nucleotide ID:ENST00000560294Re-query CCDS DB by Protein ID:ENSP00000453971
Original member Current member NCBI NM_001284395.2 NP_001271324.1 Accepted alive Link to Nucleotide Sequence:NM_001284395.2Link to Protein Sequence:NP_001271324.1Re-query CCDS DB by Nucleotide ID:NM_001284395Re-query CCDS DB by Protein ID:NP_001271324Link to BLAST:NP_001271324.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271324.1 658 Q6P2C0-2 658 100% 0 0

Chromosomal Locations for CCDS 66862.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89701747 89702049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89702950 89703142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89705554 89705618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89712026 89712104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89714980 89715095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89716911 89716949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89722055 89722139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89727157 89727328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89729023 89729093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89729683 89729769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89731443 89731562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89733090 89733219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89735490 89735553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89737573 89737729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89738041 89738236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89743292 89743391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1977 nt):
ATGTCATTCCCAAGAGGAAGTCAGACCCAGAAAATAAAGCACCCCATTGGTACACGAAAGGGACCATTGG
AGGTGCCACCCCCAACAGAGAAGGACTGGCCTAAAGACGATGAACAGGATCATGTCCTCGTGGATCCAGA
TGAGGAGCTGGATTCCTTGCCTCAGCCTTATCGAATGATCAACAAGCTGGTGAACCTTCTGTTTGACCAG
TCTTGGGAAATTATTGAAGAGAGAAACGCACTGAGGGAAGCTGAGAGCAGCCAGATCCAGCCCACCGTCT
ACCCTCCACTTGGAGAAATCCAGCTCAACAAAATGCCAAATTGTATGGCTGTTTCCCAAGACTATGTGTT
TATTGGAGGAGCCAAAGGATTCTCAATTTATAATCTGTACAGTGCTAAACAAATATATGCGTGGGAGAAG
CTTAAGGTTGATGTCACTTCCATCTGGGCCACAGATTTAGGGAATGAAATACTCATTGCTCCTGTGGATG
AAATGGGTATCATTAGACTCTTTTATTTTTATAAGGAAGGACTTTACCTAGTCAAAGCCATCAATGAAGT
GGATGATACCAGCAAGCAAACTACCTGTATAAAGATGGAGATCTCTCAAGGAGGGGACTTTGCAGCCTTC
CTCCTACAAGGAGCCGGAGATATTTGGCTGGATGTGTATAAATTGCCCAAGGAGACTTGGCTCAAGAAAC
TAGAGCACCCCCAACTCACTTCAAATCCAAAGAAAAAAGTCAGACAGCCGCAACTGAACTCCCTTGGTCC
CATTTCTGCAGATCCTTTAGAAATGGATGCAAATGTTAGTTTTAAAGGAGACATTAAATTGAGTCTTCCA
GTTTACATAATGAAGATCAAACCACCTAAGCCTGTTACAGGCACCACATTCAAAAGCCCCCTGGAAGTCT
TTGCAAAGATCAAGGACTGCTACGGACTGGGCTCCGGGCAGAATCATTTCATCAAGGACAGTCAGTGGGA
GCAGCAAGCTGAGATCTTCAACGCTTCCTACAAGAAGTACCTAGATAGGGAGTGGGAGGAAGAGCCACTC
AGTACGGCCACCTTCTATTTCCTTCTTCCTAGCTGCCTATTTGCAATGCCACCGGAAGTCAAGGGCCCCT
CAGGAATGGCCTGTGTCCTTGGTATACACTGGACCAGAAGTCACAATTTCTTCCTGTATTCACTAAACCG
AACTCTAAAGGATAAAGCTGACCCCGAGGGTGTGTGGCCCTGTGCTGCGCCCATTGCAGTCTCTCAGCTC
AGCTGCTCCTCCTCCTACCTGGTGCTGGCCTGCGAGGATGGTGTGCTCACGCTGTGGGACCTGGCCAAAG
GACAGAATATGTATCCTGAAGGTCAAGTGAAATCCCAAATGAAATGTGTGGTGCTGTGCACAGACGCCTC
CCTCCATCTGGTGGAGGCTAGCGGGACCCAAGGACCCACCATCAGTGTGCTTGTTGAGAGGCCTGTAAAG
CACCTGGATAAAACCATCTGTGCCGTGGCCCCAGTCCCAGCCTTACCTGGCATGGTGCTCATCTTTTCCA
AGAATGGCTCTGTGTGCCTTATGGATGTGGCCAAGCGTGAAATCATCTGTGCCTTTGCCCCTCCGGGAGC
CTTTCCTCTGGAGGTCCCCTGGAAGCCAGTGTTTGCTGTGTCTCCAGACCATCCATGTTTCCTGCTCCGA
GGAGACTATTCACATGAAACTGCGTCCACCGACGATGCTGGAATCCAATATTCTGTTTTCTATTTTAATT
TTGAGGCCTGCCCACTCCTGGAAAATATCTCAAAAAATTGTACCATTCCTCAAAGGGACTTGGATAACAT
GGCCTTCCCCCAAGCACTGCCACTGGAGAAGAGATGTGAGCGTTTCCTCCAGAAGAGCTATCGGAAGCTG
GAGAAGAACCCAGAGAAGGAGGAGGAGCACTGGGCCCGGCTTCAGAGGTACTCCTTGTCGCTCCAGAGAG
AGAACTTCAAGAAGTGA

Translation (658 aa):
MSFPRGSQTQKIKHPIGTRKGPLEVPPPTEKDWPKDDEQDHVLVDPDEELDSLPQPYRMINKLVNLLFDQ
SWEIIEERNALREAESSQIQPTVYPPLGEIQLNKMPNCMAVSQDYVFIGGAKGFSIYNLYSAKQIYAWEK
LKVDVTSIWATDLGNEILIAPVDEMGIIRLFYFYKEGLYLVKAINEVDDTSKQTTCIKMEISQGGDFAAF
LLQGAGDIWLDVYKLPKETWLKKLEHPQLTSNPKKKVRQPQLNSLGPISADPLEMDANVSFKGDIKLSLP
VYIMKIKPPKPVTGTTFKSPLEVFAKIKDCYGLGSGQNHFIKDSQWEQQAEIFNASYKKYLDREWEEEPL
STATFYFLLPSCLFAMPPEVKGPSGMACVLGIHWTRSHNFFLYSLNRTLKDKADPEGVWPCAAPIAVSQL
SCSSSYLVLACEDGVLTLWDLAKGQNMYPEGQVKSQMKCVVLCTDASLHLVEASGTQGPTISVLVERPVK
HLDKTICAVAPVPALPGMVLIFSKNGSVCLMDVAKREIICAFAPPGAFPLEVPWKPVFAVSPDHPCFLLR
GDYSHETASTDDAGIQYSVFYFNFEACPLLENISKNCTIPQRDLDNMAFPQALPLEKRCERFLQKSYRKL
EKNPEKEEEHWARLQRYSLSLQRENFKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH