NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS66898.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66898.1 Public Homo sapiens 16 NUBP2 24 110 108 CCDS HistoryNCBI Gene:10101Re-query CCDS DB by CCDS ID:66898.1Re-query CCDS DB by GeneID:10101See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66898.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000565987.5 ENSP00000455896.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565987.5Link to Ensembl Protein Viewer:ENSP00000455896.1Re-query CCDS DB by Nucleotide ID:ENST00000565987Re-query CCDS DB by Protein ID:ENSP00000455896
Original member Current member NCBI NM_001284501.2 NP_001271430.1 Accepted alive Link to Nucleotide Sequence:NM_001284501.2Link to Protein Sequence:NP_001271430.1Re-query CCDS DB by Nucleotide ID:NM_001284501Re-query CCDS DB by Protein ID:NP_001271430Link to BLAST:NP_001271430.1

Chromosomal Locations for CCDS 66898.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1786802 1786955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1787677 1787831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1787941 1788051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1788138 1788207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1788569 1788714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGCTCGGGGCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGCACCCGTCTTCCTGGACCGGG
AGCAGAGCATCTCGCTCATGTCTGTGGGCTTCCTGCTGGAGAAGCCGGACGAGGCCGTGGTGTGGAGAGG
CCCCAAGAAAAACGCGCTGATAAAGCAGTTTGTGTCCGACGTGGCCTGGGGGGAGCTGGACTACCTGGTG
GTGGACACGCCCCCGGGGACCTCCGATGAGCACATGGCCACCATAGAAGCCCTGCGTCCCTACCAGCCCC
TGGGGGCCCTCGTGGTCACCACGCCCCAGGCGGTGTCCGTGGGGGACGTGAGGCGCGAGCTGACCTTCTG
TAGGAAGACGGGCTTGCGGGTGATGGGAATCGTGGAGAATATGAGCGGCTTCACCTGCCCACACTGCACG
GAGTGCACCAGCGTCTTCTCCAGGGGCGGCGGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTTAG
GCTCCGTGCCCCTGGACCCTGCGCTCATGAGGACCCTGGAGGAGGGCCACGACTTCATCCAGGAGTTCCC
TGGGAGCCCCGCCTTCGCTGCACTCACCTCCATAGCCCAGAAGATTCTGGACGCGACGCCCGCGTGCCTC
CCCTGA

Translation (211 aa):
MLGAQGRAVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELDYLV
VDTPPGTSDEHMATIEALRPYQPLGALVVTTPQAVSVGDVRRELTFCRKTGLRVMGIVENMSGFTCPHCT
ECTSVFSRGGGEELAQLAGVPFLGSVPLDPALMRTLEEGHDFIQEFPGSPAFAALTSIAQKILDATPACL
P


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH