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Report for CCDS67049.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
67049.1 Public Homo sapiens 16 DYNC1LI2 24 110 108 CCDS HistoryNCBI Gene:1783Re-query CCDS DB by CCDS ID:67049.1Re-query CCDS DB by GeneID:1783See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 67049.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000443351.6 ENSP00000394289.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000443351.6Link to Ensembl Protein Viewer:ENSP00000394289.2Re-query CCDS DB by Nucleotide ID:ENST00000443351Re-query CCDS DB by Protein ID:ENSP00000394289
Original member Current member NCBI NM_001286157.2 NP_001273086.1 Accepted alive Link to Nucleotide Sequence:NM_001286157.2Link to Protein Sequence:NP_001273086.1Re-query CCDS DB by Nucleotide ID:NM_001286157Re-query CCDS DB by Protein ID:NP_001273086Link to BLAST:NP_001273086.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273086.1 415 O43237-2 415 100% 0 0

Chromosomal Locations for CCDS 67049.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 66723722 66723822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66725828 66725944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66727688 66727805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66728201 66728242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66729040 66729099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66730112 66730223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66732339 66732474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66734218 66734311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66736075 66736244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66749197 66749313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66751273 66751346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66751485 66751591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1248 nt):
ATGGCGCCGGTGGGGGTGGAGAAGAAGCTGCTGCTAGGTCCCAACGGGCCCGCGGTGGCGGCCGCCGGCG
ACCTGACCAGTGAGGAGGAGGAAGGCCAGAGCCTATGGTCCTCCATTCTGAGCGAAGTGTCCACCCGCGC
CAGGTCCAAGCTGCCGTCCGGCAAGAACATCCTGGTCTTCGGTGAAGATGGTTCTGGTAAAACAACCCTC
ATGACTAAACTACAAGGAGCTGAGCATGGCAAAAAAGGAAGAGGCCTAGAATATCTCTACCTCAGTGTCC
ATGATGAGGACCGAGATGTTGTGAAAGATTTTCAAGACTATATGGAACCTGAAGAAGGTTGTCAAGGTTC
CCCACAGAGAAGAGGCCCTCTGACCTCAGGCTCCGATGAAGAAAATGTTGCCCTGCCTCTGGGTGACAAT
GTGCTGACTCATAACCTGGGGATCCCGGTGTTGGTGGTGTGCACAAAGTGTGATGCGGTGAGTGTCCTGG
AGAAGGAGCACGATTACAGGGATGAGCATTTGGACTTTATCCAGTCACACCTGCGGAGGTTCTGCCTTCA
GTATGGAGCTGCCTTGATTTACACATCAGTGAAAGAAGAGAAAAACCTCGACTTGTTGTATAAGTATATT
GTTCATAAAACATACGGTTTCCACTTCACCACACCTGCCTTAGTTGTGGAAAAGGATGCCGTTTTTATAC
CTGCAGGCTGGGACAATGAAAAGAAAATAGCTATTTTACATGAAAATTTTACAACCGTGAAGCCGGAAGA
TGCATATGAAGACTTTATTGTGAAACCTCCCGTGAGAAAGCTGGTCCACGACAAAGAGTTGGCAGCAGAA
GATGAGCAGGTGTTCCTAATGAAGCAACAGTCACTCCTTGCCAAGCAACCAGCCACTCCCACGAGAGCTT
CTGAATCTCCTGCAAGAGGACCCTCTGGCTCTCCAAGGACCCAGGGTCGGGGAGGGCCAGCCAGTGTGCC
TAGCTCCTCCCCAGGCACGTCAGTAAAAAAGCCGGACCCAAACATCAAAAATAATGCAGCAAGTGAAGGG
GTGTTGGCCAGCTTCTTCAACAGTCTGTTGAGTAAAAAGACAGGCTCTCCTGGAAGTCCTGGTGCTGGTG
GGGTGCAGAGCACAGCCAAGAAGTCAGGACAAAAGACTGTGTTGTCAAATGTTCAGGAAGAACTGGATAG
AATGACTCGAAAGCCAGACTCTATGGTAACAAACTCTTCAACAGAAAATGAAGCCTGA

Translation (415 aa):
MAPVGVEKKLLLGPNGPAVAAAGDLTSEEEEGQSLWSSILSEVSTRARSKLPSGKNILVFGEDGSGKTTL
MTKLQGAEHGKKGRGLEYLYLSVHDEDRDVVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGDN
VLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYI
VHKTYGFHFTTPALVVEKDAVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAE
DEQVFLMKQQSLLAKQPATPTRASESPARGPSGSPRTQGRGGPASVPSSSPGTSVKKPDPNIKNNAASEG
VLASFFNSLLSKKTGSPGSPGAGGVQSTAKKSGQKTVLSNVQEELDRMTRKPDSMVTNSSTENEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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