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Report for CCDS6705.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6705.1 Public Homo sapiens 9 FAM120AOS 24 110 108 CCDS HistoryNCBI Gene:158293Re-query CCDS DB by CCDS ID:6705.1Re-query CCDS DB by GeneID:158293See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6705.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375412.11 ENSP00000364561.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375412.11Link to Ensembl Protein Viewer:ENSP00000364561.5Re-query CCDS DB by Nucleotide ID:ENST00000375412Re-query CCDS DB by Protein ID:ENSP00000364561
Original member Current member NCBI NM_198841.4 NP_942138.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198841.4Link to Protein Sequence:NP_942138.2Re-query CCDS DB by Nucleotide ID:NM_198841Re-query CCDS DB by Protein ID:NP_942138Link to BLAST:NP_942138.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_942138.2 256 Q5T036 256 100% 0 0

Chromosomal Locations for CCDS 6705.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 93447611 93447697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93450479 93450599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93452147 93452709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (771 nt):
ATGGGAAAAACTAAGGATATTGGGGATGATGACACTGTCGCCTCCGAATTCTGGTCCGGGGCTCTCTCCC
AGCCCTCAAGTGTCCCCACGCGGCCGCGGACCCCGAACAGGGACAGCTGGAGACGGGCTTGGGCAGCGCG
CGGCCTGCACCCGCGGCCATCCATCTTGCAGCCCGGCCCGGCCAGGCTATCCCGGGCAAGGGCTGGGGGA
ACTCGCTGCCCCCAGCGCCGCCACGGCCGGGCGACATTCTGCGCCCTGGGAAGGGGGATAGGGGTGCGGC
GCGGCCCCGGTCCCCGGCCCGCCCGGATCCCCGGCCTCACCTTGACGTGGAAGCGGATGAGCGCCAGGCG
GATGCAGTGGGCCATGCAGACGGGCGGCAGGAACCAGACCTTTGGCGGCGGGGTGCCCTTGTTCTGGACA
TGGCTGACGATCTGCTGTGCCGTCTGGCGCTCGTTGCCCTGCCGCTTGACCCACTCGTGCAGCCGGGCCT
TCTCGAGCGCGCCGTTGAAGAAGACGAAGAGCTCGATGTTGCCGCCGAAGCAGGCCTTGGCCAGCGCCGC
CAGAAACCTCTGTAGAGGAGCAGGATGCAACCGACAGGCTGTGGCCGGACAGCTGCTGCCCAGCACATGG
AGCCTGCACGCGCACGGTTTGGCCAAAGAAGCCCCCATACTCCCGGTGAAAAAGATTTCCAGAAGCTGTT
CTGTCAATAACAAAGTCTCAAAGAAAACCACAAAACCACCAACACTAAGATCATTCTTGAGTCCAATTTG
A

Translation (256 aa):
MGKTKDIGDDDTVASEFWSGALSQPSSVPTRPRTPNRDSWRRAWAARGLHPRPSILQPGPARLSRARAGG
TRCPQRRHGRATFCALGRGIGVRRGPGPRPARIPGLTLTWKRMSARRMQWAMQTGGRNQTFGGGVPLFWT
WLTICCAVWRSLPCRLTHSCSRAFSSAPLKKTKSSMLPPKQALASAARNLCRGAGCNRQAVAGQLLPSTW
SLHAHGLAKEAPILPVKKISRSCSVNNKVSKKTTKPPTLRSFLSPI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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