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Report for CCDS671.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
671.1 Public Homo sapiens 1 ASB17 24 110 108 CCDS HistoryNCBI Gene:127247Re-query CCDS DB by CCDS ID:671.1Re-query CCDS DB by GeneID:127247See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 671.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000284142.7 ENSP00000284142.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000284142.7Link to Ensembl Protein Viewer:ENSP00000284142.6Re-query CCDS DB by Nucleotide ID:ENST00000284142Re-query CCDS DB by Protein ID:ENSP00000284142
Original member Current member NCBI NM_080868.3 NP_543144.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_080868.3Link to Protein Sequence:NP_543144.1Re-query CCDS DB by Nucleotide ID:NM_080868Re-query CCDS DB by Protein ID:NP_543144Link to BLAST:NP_543144.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_543144.1 295 Q8WXJ9 295 100% 0 0

Chromosomal Locations for CCDS 671.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 75918952 75919158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75922080 75922359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75931891 75932291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGAGTAAATCTACTAAATTATGTGGTAAGACTTCTTGTCCAAGAAGCAATATATTCTGCAATCTCCTTG
ACAAAATTGTTAAAAGACCCTCCCTACAGTTTTTGGGTCAGTGGGGATATCACTGTTACGAACCAAGGAT
TTACAGATCACTGGCAAAAATTCTGAGGTATGTGGACTTGGATGGTTTTGACGCACTACTCACAGATTAC
ATTGCATTTGTGGAAAAATCAGGATACCGTTTTGAAGTAAGTTTTAACCTCGACTTCACTGAAATATGTG
TGAATACAATTCTGTACTGGGTTTTTGCCAGAAAAGGTAATCCTGACTTTGTGGAATTGCTTCTCAAGAA
GACAAAAGACTATGTTCAAGACAGAAGTTGTAACCTGGCACTGATATGGAGAACTTTCACACCAGTATAC
TGTCCAAGCCCATTAAGTGGCATCACACCTCTCTTTTATGTAGCTCAGACAAGACAGTCTAATATCTTCA
AAATACTACTGCAATATGGAATCTTAGAAAGAGAAAAAAACCCTATCAACATTGTCTTAACAATAGTACT
CTACCCTTCGAGAGTAAGAGTAATGGTTGATCGTGAATTGGCTGACATCCATGAAGATGCCAAAACATGT
TTGGTACTATGTTCCAGAGTGCTTTCTGTCATTTCAGTCAAGGAAATAAAGACACAGCTGAGTTTAGGAA
GACATCCAATTATTTCAAATTGGTTTGATTACATTCCTTCAACAAGATACAAAGATCCATGTGAACTATT
ACATCTTTGCAGACTAACCATCAGGAATCAACTATTAACCAACAATATGCTCCCAGATGGAATATTTTCA
CTTCTAATTCCTGCTCGTCTACAAAACTATCTGAATTTAGAAATCTAA

Translation (295 aa):
MSKSTKLCGKTSCPRSNIFCNLLDKIVKRPSLQFLGQWGYHCYEPRIYRSLAKILRYVDLDGFDALLTDY
IAFVEKSGYRFEVSFNLDFTEICVNTILYWVFARKGNPDFVELLLKKTKDYVQDRSCNLALIWRTFTPVY
CPSPLSGITPLFYVAQTRQSNIFKILLQYGILEREKNPINIVLTIVLYPSRVRVMVDRELADIHEDAKTC
LVLCSRVLSVISVKEIKTQLSLGRHPIISNWFDYIPSTRYKDPCELLHLCRLTIRNQLLTNNMLPDGIFS
LLIPARLQNYLNLEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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