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Report for CCDS6808.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6808.1 Public Homo sapiens 9 TMEM268 24 110 108 CCDS HistoryNCBI Gene:203197Re-query CCDS DB by CCDS ID:6808.1Re-query CCDS DB by GeneID:203197See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6808.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000288502.9 ENSP00000288502.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000288502.9Link to Ensembl Protein Viewer:ENSP00000288502.4Re-query CCDS DB by Nucleotide ID:ENST00000288502Re-query CCDS DB by Protein ID:ENSP00000288502
Original member Current member NCBI NM_153045.4 NP_694590.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153045.4Link to Protein Sequence:NP_694590.2Re-query CCDS DB by Nucleotide ID:NM_153045Re-query CCDS DB by Protein ID:NP_694590Link to BLAST:NP_694590.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694590.2 342 Q5VZI3-1 342 100% 0 0

Chromosomal Locations for CCDS 6808.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 114617196 114617301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114624350 114624459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114626899 114627006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114628101 114628250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114633768 114633878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114636990 114637070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114638544 114638726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114643134 114643313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1029 nt):
ATGGCCTGTGAACCACAGGTGGACCCGGGGGCCACTGGCCCATTGCCCCCCTCCTCCCCTGGCTGGAGTG
CCCTGCCTGGAGGGAGCCCTCCTGGCTGGGGGCAAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCG
GATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGC
ATCCAGGTCCCGGCTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAGAT
ATATCATCTACAACTCGAGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAA
TATCTACTCTACCAGTCAGATGTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCC
GCGGTGAGCCTGACCTTGACTCTTGTGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGG
ACCTGAGGCTGGCAGCTGCCAATGGAGCCCTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGT
GGAAGGATGCCAGAGTGTGATTCAGCTTTGGTTTGTCTACTTCGACCTGGAGAACTGTGTGCAGTTTTTG
TCTGATCATGTTCAAGAAATGAAGACTAGCCAAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTG
TTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGGCCTGAGAACTTGGAGGATGCTCCTCTCCT
GCCCGGCAATTCTTGTCCTAACGAGAGGCCACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAGGCT
GAGCCGGAGGAAATGGCCCGCCAGCTGCTGGCAGTGTTTGGCGGCTACTACATCCGGCTTCTAGTGACCT
CCCAGCTCCCTCAGGCAATGGGGACACGACACACGAACTCTCCGAGAATTCCATGCCCCTGCCAGCTCAT
AGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCCTGGCGAGGTGA

Translation (342 aa):
MACEPQVDPGATGPLPPSSPGWSALPGGSPPGWGQELHNGQVLTVLRIDNTCAPISFDLGAAEEQLQTWG
IQVPADQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVVVWANIYSTSQMFALGNHWAGMLLVTLA
AVSLTLTLVLVFERHQKKANTNTDLRLAAANGALLRHRVLLGVTDTVEGCQSVIQLWFVYFDLENCVQFL
SDHVQEMKTSQESLLRSRLSQLCVVMETGVSPATAEGPENLEDAPLLPGNSCPNERPLMQTELHQLVPEA
EPEEMARQLLAVFGGYYIRLLVTSQLPQAMGTRHTNSPRIPCPCQLIEAYILGTGCCPFLAR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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