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Report for CCDS6829.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6829.1 Public Homo sapiens 9 GSN 24 110 108 CCDS HistoryNCBI Gene:2934Re-query CCDS DB by CCDS ID:6829.1Re-query CCDS DB by GeneID:2934See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6829.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373823.7 ENSP00000362929.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373823.7Link to Ensembl Protein Viewer:ENSP00000362929.2Re-query CCDS DB by Nucleotide ID:ENST00000373823Re-query CCDS DB by Protein ID:ENSP00000362929
Original member Current member EBI ENST00000432226.7 ENSP00000404226.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000432226.7Link to Ensembl Protein Viewer:ENSP00000404226.2Re-query CCDS DB by Nucleotide ID:ENST00000432226Re-query CCDS DB by Protein ID:ENSP00000404226
Original member Current member NCBI NM_001127662.2 NP_001121134.1 Accepted alive Link to Nucleotide Sequence:NM_001127662.2Link to Protein Sequence:NP_001121134.1Re-query CCDS DB by Nucleotide ID:NM_001127662Re-query CCDS DB by Protein ID:NP_001121134Link to BLAST:NP_001121134.1
Original member Current member NCBI NM_001127664.2 NP_001121136.1 Accepted alive Link to Nucleotide Sequence:NM_001127664.2Link to Protein Sequence:NP_001121136.1Re-query CCDS DB by Nucleotide ID:NM_001127664Re-query CCDS DB by Protein ID:NP_001121136Link to BLAST:NP_001121136.1
Original member Current member NCBI NM_001127665.2 NP_001121137.1 Accepted alive Link to Nucleotide Sequence:NM_001127665.2Link to Protein Sequence:NP_001121137.1Re-query CCDS DB by Nucleotide ID:NM_001127665Re-query CCDS DB by Protein ID:NP_001121137Link to BLAST:NP_001121137.1
Original member Current member NCBI NM_001353053.1 NP_001339982.1 Accepted alive Link to Nucleotide Sequence:NM_001353053.1Link to Protein Sequence:NP_001339982.1Re-query CCDS DB by Nucleotide ID:NM_001353053Re-query CCDS DB by Protein ID:NP_001339982Link to BLAST:NP_001339982.1
Original member Current member NCBI NM_001353054.1 NP_001339983.1 Accepted alive Link to Nucleotide Sequence:NM_001353054.1Link to Protein Sequence:NP_001339983.1Re-query CCDS DB by Nucleotide ID:NM_001353054Re-query CCDS DB by Protein ID:NP_001339983Link to BLAST:NP_001339983.1
Original member Current member NCBI NM_001353055.2 NP_001339984.1 Accepted alive Link to Nucleotide Sequence:NM_001353055.2Link to Protein Sequence:NP_001339984.1Re-query CCDS DB by Nucleotide ID:NM_001353055Re-query CCDS DB by Protein ID:NP_001339984Link to BLAST:NP_001339984.1
Original member Current member NCBI NM_001353056.2 NP_001339985.1 Accepted alive Link to Nucleotide Sequence:NM_001353056.2Link to Protein Sequence:NP_001339985.1Re-query CCDS DB by Nucleotide ID:NM_001353056Re-query CCDS DB by Protein ID:NP_001339985Link to BLAST:NP_001339985.1
Original member Current member NCBI NM_001353057.2 NP_001339986.1 Accepted alive Link to Nucleotide Sequence:NM_001353057.2Link to Protein Sequence:NP_001339986.1Re-query CCDS DB by Nucleotide ID:NM_001353057Re-query CCDS DB by Protein ID:NP_001339986Link to BLAST:NP_001339986.1
Original member Current member NCBI NM_001353058.2 NP_001339987.1 Accepted alive Link to Nucleotide Sequence:NM_001353058.2Link to Protein Sequence:NP_001339987.1Re-query CCDS DB by Nucleotide ID:NM_001353058Re-query CCDS DB by Protein ID:NP_001339987Link to BLAST:NP_001339987.1
Original member Current member NCBI NM_001353059.2 NP_001339988.1 Accepted alive Link to Nucleotide Sequence:NM_001353059.2Link to Protein Sequence:NP_001339988.1Re-query CCDS DB by Nucleotide ID:NM_001353059Re-query CCDS DB by Protein ID:NP_001339988Link to BLAST:NP_001339988.1
Original member Current member NCBI NM_001353060.2 NP_001339989.1 Accepted alive Link to Nucleotide Sequence:NM_001353060.2Link to Protein Sequence:NP_001339989.1Re-query CCDS DB by Nucleotide ID:NM_001353060Re-query CCDS DB by Protein ID:NP_001339989Link to BLAST:NP_001339989.1
Original member Current member NCBI NM_001353061.2 NP_001339990.1 Accepted alive Link to Nucleotide Sequence:NM_001353061.2Link to Protein Sequence:NP_001339990.1Re-query CCDS DB by Nucleotide ID:NM_001353061Re-query CCDS DB by Protein ID:NP_001339990Link to BLAST:NP_001339990.1
Original member Current member NCBI NM_001353062.1 NP_001339991.1 Accepted alive Link to Nucleotide Sequence:NM_001353062.1Link to Protein Sequence:NP_001339991.1Re-query CCDS DB by Nucleotide ID:NM_001353062Re-query CCDS DB by Protein ID:NP_001339991Link to BLAST:NP_001339991.1
Original member Current member NCBI NM_198252.3 NP_937895.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198252.3Link to Protein Sequence:NP_937895.1Re-query CCDS DB by Nucleotide ID:NM_198252Re-query CCDS DB by Protein ID:NP_937895Link to BLAST:NP_937895.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121134.1 731 P06396-2 731 100% 0 0
NP_001121136.1 731 P06396-2 731 100% 0 0
NP_001121137.1 731 P06396-2 731 100% 0 0
NP_001339982.1 731 P06396-2 731 100% 0 0
NP_001339983.1 731 P06396-2 731 100% 0 0
NP_001339984.1 731 P06396-2 731 100% 0 0
NP_001339985.1 731 P06396-2 731 100% 0 0
NP_001339986.1 731 P06396-2 731 100% 0 0
NP_001339987.1 731 P06396-2 731 100% 0 0
NP_001339988.1 731 P06396-2 731 100% 0 0
NP_001339989.1 731 P06396-2 731 100% 0 0
NP_001339990.1 731 P06396-2 731 100% 0 0
NP_001339991.1 731 P06396-2 731 100% 0 0
NP_937895.1 731 P06396-2 731 100% 0 0

Chromosomal Locations for CCDS 6829.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 121301972 121302167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121302911 121303065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121310684 121310845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121312339 121312488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121313934 121314023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121317086 121317218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121318406 121318494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121318665 121318880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121321268 121321401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121324554 121324644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121326512 121326682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121327308 121327482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121328891 121329015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121329238 121329315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121331388 121331448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121332434 121332603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2196 nt):
ATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGGAGCCTGGCCTGCAGATCTGGCGTGTGGAGA
AGTTCGATCTGGTGCCCGTGCCCACCAACCTTTATGGAGACTTCTTCACGGGCGACGCCTACGTCATCCT
GAAGACAGTGCAGCTGAGGAACGGAAATCTGCAGTATGACCTCCACTACTGGCTGGGCAATGAGTGCAGC
CAGGATGAGAGCGGGGCGGCCGCCATCTTTACCGTGCAGCTGGATGACTACCTGAACGGCCGGGCCGTGC
AGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTTCCTAGGCTACTTCAAGTCTGGCCTGAAGTACAA
GAAAGGAGGTGTGGCATCAGGATTCAAGCACGTGGTACCCAACGAGGTGGTGGTGCAGAGACTCTTCCAG
GTCAAAGGGCGGCGTGTGGTCCGTGCCACCGAGGTACCTGTGTCCTGGGAGAGCTTCAACAATGGCGACT
GCTTCATCCTGGACCTGGGCAACAACATCCACCAGTGGTGTGGTTCCAACAGCAATCGGTATGAAAGACT
GAAGGCCACACAGGTGTCCAAGGGCATCCGGGACAACGAGCGGAGTGGCCGGGCCCGAGTGCACGTGTCT
GAGGAGGGCACTGAGCCCGAGGCGATGCTCCAGGTGCTGGGCCCCAAGCCGGCTCTGCCTGCAGGTACCG
AGGACACCGCCAAGGAGGATGCGGCCAACCGCAAGCTGGCCAAGCTCTACAAGGTCTCCAATGGTGCAGG
GACCATGTCCGTCTCCCTCGTGGCTGATGAGAACCCCTTCGCCCAGGGGGCCCTGAAGTCAGAGGACTGC
TTCATCCTGGACCACGGCAAAGATGGGAAAATCTTTGTCTGGAAAGGCAAGCAGGCAAACACGGAGGAGA
GGAAGGCTGCCCTCAAAACAGCCTCTGACTTCATCACCAAGATGGACTACCCCAAGCAGACTCAGGTCTC
GGTCCTTCCTGAGGGCGGTGAGACCCCACTGTTCAAGCAGTTCTTCAAGAACTGGCGGGACCCAGACCAG
ACAGATGGCCTGGGCTTGTCCTACCTTTCCAGCCATATCGCCAACGTGGAGCGGGTGCCCTTCGACGCCG
CCACCCTGCACACCTCCACTGCCATGGCCGCCCAGCACGGCATGGATGACGATGGCACAGGCCAGAAACA
GATCTGGAGAATCGAAGGTTCCAACAAGGTGCCCGTGGACCCTGCCACATATGGACAGTTCTATGGAGGC
GACAGCTACATCATTCTGTACAACTACCGCCATGGTGGCCGCCAGGGGCAGATAATCTATAACTGGCAGG
GTGCCCAGTCTACCCAGGATGAGGTCGCTGCATCTGCCATCCTGACTGCTCAGCTGGATGAGGAGCTGGG
AGGTACCCCTGTCCAGAGCCGTGTGGTCCAAGGCAAGGAGCCCGCCCACCTCATGAGCCTGTTTGGTGGG
AAGCCCATGATCATCTACAAGGGCGGCACCTCCCGCGAGGGCGGGCAGACAGCCCCTGCCAGCACCCGCC
TCTTCCAGGTCCGCGCCAACAGCGCTGGAGCCACCCGGGCTGTTGAGGTATTGCCTAAGGCTGGTGCACT
GAACTCCAACGATGCCTTTGTTCTGAAAACCCCCTCAGCCGCCTACCTGTGGGTGGGTACAGGAGCCAGC
GAGGCAGAGAAGACGGGGGCCCAGGAGCTGCTCAGGGTGCTGCGGGCCCAACCTGTGCAGGTGGCAGAAG
GCAGCGAGCCAGATGGCTTCTGGGAGGCCCTGGGCGGGAAGGCTGCCTACCGCACATCCCCACGGCTGAA
GGACAAGAAGATGGATGCCCATCCTCCTCGCCTCTTTGCCTGCTCCAACAAGATTGGACGTTTTGTGATC
GAAGAGGTTCCTGGTGAGCTCATGCAGGAAGACCTGGCAACGGATGACGTCATGCTTCTGGACACCTGGG
ACCAGGTCTTTGTCTGGGTTGGAAAGGATTCTCAAGAAGAAGAAAAGACAGAAGCCTTGACTTCTGCTAA
GCGGTACATCGAGACGGACCCAGCCAATCGGGATCGGCGGACGCCCATCACCGTGGTGAAGCAAGGCTTT
GAGCCTCCCTCCTTTGTGGGCTGGTTCCTTGGCTGGGATGATGATTACTGGTCTGTGGACCCCTTGGACA
GGGCCATGGCTGAGCTGGCTGCCTGA

Translation (731 aa):
MVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECS
QDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLFQ
VKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVS
EEGTEPEAMLQVLGPKPALPAGTEDTAKEDAANRKLAKLYKVSNGAGTMSVSLVADENPFAQGALKSEDC
FILDHGKDGKIFVWKGKQANTEERKAALKTASDFITKMDYPKQTQVSVLPEGGETPLFKQFFKNWRDPDQ
TDGLGLSYLSSHIANVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRIEGSNKVPVDPATYGQFYGG
DSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGG
KPMIIYKGGTSREGGQTAPASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGAS
EAEKTGAQELLRVLRAQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKKMDAHPPRLFACSNKIGRFVI
EEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVKQGF
EPPSFVGWFLGWDDDYWSVDPLDRAMAELAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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