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Report for CCDS69155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69155.1 Public Homo sapiens 6 KLHL32 24 110 108 CCDS HistoryNCBI Gene:114792Re-query CCDS DB by CCDS ID:69155.1Re-query CCDS DB by GeneID:114792See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 69155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539200.5 ENSP00000441527.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539200.5Link to Ensembl Protein Viewer:ENSP00000441527.1Re-query CCDS DB by Nucleotide ID:ENST00000539200Re-query CCDS DB by Protein ID:ENSP00000441527
Original member Current member NCBI NM_001286251.2 NP_001273180.1 Accepted alive Link to Nucleotide Sequence:NM_001286251.2Link to Protein Sequence:NP_001273180.1Re-query CCDS DB by Nucleotide ID:NM_001286251Re-query CCDS DB by Protein ID:NP_001273180Link to BLAST:NP_001273180.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273180.1 551 Q96NJ5-3 551 100% 0 0

Chromosomal Locations for CCDS 69155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 96967061 96967083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 96975997 96976177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 97085126 97085341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 97113783 97114509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 97127404 97127462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 97130757 97130949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 97132653 97132747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 97139121 97139282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1656 nt):
ATGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGCCAGAGGCTCTGCCACTCCGAATCTC
ACAATGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATCCTCTGCGACATCACCCTGAT
TGCTGAGGAACAGAAATTCCATGCTCACAAGGCAGTCCTAGCAGCATGCAGTGACTATTTCCGGGAATTA
AATAGCTTTAATTACTTGGATCTGTACAGACTTGCTGACCTCTTTAACCTCACTTTGTTGGAGAAGGCAG
TGATCGATTTCTTAGTGAAACATCTCTCTGAACTCCTGAAGAGCCGCCCAGAAGAAGTTCTAACGCTTCC
CTATTGCCTGCTTCAGGAGGTGCTGAAGAGCGACCGCCTGACCTCCCTGAGTGAAGAGCAGATCTGGCAG
CTAGCTGTGAGGTGGTTGGAACACAACTGCCACTACCAGTACATGGACGAGCTCCTGCAATACATCCGCT
TTGGCCTAATGGATGTGGATACTCTCCATACAGTTGCCCTGTCCCACCCCCTTGTCCAAGCAAGTGAGAC
TGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCTATGCACAGCCTGTCTGGCAGACT
CGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGTGGGAAAAAGCGCGAGGTCTGCA
AGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCAACTG
GAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGGACTTCCTGTTT
GTGGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTGCTGTGAGGACTGCCTGTCGCTATGACC
CCCGCAGTAATTCCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGGAGCATTTTGTGCTGGGTGCCAT
GGAGGAATACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGTTGAGCGATAT
TGCCCCAAGAAGAACAAATGGACTTTTGTTCAGTCCTTTGACAGATCCCTTTCATGCCATGCTGGATATG
TGGCTGATGGTCTTCTTTGGATATCAGGTGGAGTAACTAATACGGCACAATATCAGAACAGGCTAATGGT
GTATGAACCTAACCAGAATAAGTGGATAAGCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATG
GCTGCTGTACAAAGGAAGCTTTATGTTCTTGGAGGCAATGACCTAGACTACAATAATGACCGGATCCTTG
TGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGGACACGTTGTAATTTCAACCTGCTGACTGG
CCAAAATGAATCTGGAGTTGCTGTCCATAATGGGAGAATATATTTAGTTGGTGGATATTCAATTTGGACA
AATGAGCCTCTGGCTTGTATCCAGGTACTGGATGTAAGCAGAGAAGGCAAAGAAGAAGTATTCTATGGGC
CTACACTCCCTTTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAA
CCTTCAAACTCTTCAAGTGCCTCATCACAGGATTGGCACCATCTGA

Translation (551 aa):
MPSERCLSIQEMLTGQRLCHSESHNDSVLAALNQQRSDGILCDITLIAEEQKFHAHKAVLAACSDYFREL
NSFNYLDLYRLADLFNLTLLEKAVIDFLVKHLSELLKSRPEEVLTLPYCLLQEVLKSDRLTSLSEEQIWQ
LAVRWLEHNCHYQYMDELLQYIRFGLMDVDTLHTVALSHPLVQASETATALVNEALEYHQSIYAQPVWQT
RRTKPRFQSDTLYIIGGKKREVCKVKELRYFNPVDQENALIAAIANWSELAPMPVGRSHHCVAVMGDFLF
VAGGEVEHASGRTCAVRTACRYDPRSNSWAEIAPMKNCREHFVLGAMEEYLYAVGGRNELRQVLPTVERY
CPKKNKWTFVQSFDRSLSCHAGYVADGLLWISGGVTNTAQYQNRLMVYEPNQNKWISRSPMLQRRVYHSM
AAVQRKLYVLGGNDLDYNNDRILVRHIDSYNIDTDQWTRCNFNLLTGQNESGVAVHNGRIYLVGGYSIWT
NEPLACIQVLDVSREGKEEVFYGPTLPFASNGIAACFLPAPYFTCPNLQTLQVPHHRIGTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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