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Report for CCDS69191.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69191.1 Public Homo sapiens 6 RNF217 24 110 108 CCDS HistoryNCBI Gene:154214Re-query CCDS DB by CCDS ID:69191.1Re-query CCDS DB by GeneID:154214See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69191.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000521654.7 ENSP00000428698.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000521654.7Link to Ensembl Protein Viewer:ENSP00000428698.2Re-query CCDS DB by Nucleotide ID:ENST00000521654Re-query CCDS DB by Protein ID:ENSP00000428698
Original member Current member NCBI NM_001286398.3 NP_001273327.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001286398.3Link to Protein Sequence:NP_001273327.1Re-query CCDS DB by Nucleotide ID:NM_001286398Re-query CCDS DB by Protein ID:NP_001273327Link to BLAST:NP_001273327.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273327.1 542 Q8TC41-1 542 100% 0 0

Chromosomal Locations for CCDS 69191.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 124962545 124963426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125045211 125045444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125057942 125058106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125076657 125076858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125081436 125081507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125082864 125082937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1629 nt):
ATGGGCGAGGAGCAGAGCACGGTGAGCGGCGGCGGCGGGCCCCAGGAGTCGCAGACCCTGGCCAGTGGCA
CTGCGGGCCACCCTGAGCCCCCGAGGCCTCAGGGGGACAGCGCCCGGGCGCCCCCGCTGCGCGCCGCCTC
CGCGGAGCCGAGCGGCGGTGGCTGCGGAAGCGACTGGGGCTGCGCGGACACCAGCGCCCCAGAGCCCGCG
AGGAGCCTGGGGCCCCCGGGCTGGAGTAAGAGCCGAGCACCGGCGCAGCCTGCGGGACTGGCACTCACCG
GGCCTCTCAATCCCCAGACCTTGCCACTGCAGTTGGAGCTGGAGGAGGAAGAGGAGGAAGCTGGGGATCG
AAAAGAGGGAGGGGATGAACAGCAGGAGGCGCCCCCCGGCGAAGAGCTGGAGCCCAGGACCCGCGTGGGG
GCCGCCGACGGACTGGTCCTGGACGTGCTGGGTCAGCGGCGCCCGTCCCTCGCCAAGAGACAAGTCTTCT
GCTCCGTGTACTGCGTGGAGAGCGACCTGCCCGAGGCCCCCGCCTCGGAGCAGCTCTCGCCGCCCGCGTC
GCCACCTGGGGCTCCGCCAGTGTTGAACCCTCCCAGCACCCGCTCTTCCTTCCCCAGCCCCCGACTGTCC
CTCCCAACGGATTCCCTCTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCTACCTGGCGCCCGAGCCGT
TCTCCATGCCCAGCCTGTTGGGAGCTCCACCCTACTCTGGCCTGGGCGGTGTAGGGGATCCCTATGTGCC
CCTCATGGTGCTGATGTGCCGGGTGTGCCTGGAAGACAAGCCCATCAAGCCCCTGCCTTGCTGCAAGAAG
GCCGTGTGCGAGGAGTGCCTCAAAGTCTACCTGAGCGCCCAGGTACAACTTGGCCAAGTAGAAATCAAAT
GCCCCATCACAGAGTGTTTTGAATTCTTGGAAGAAACAACTGTTGTCTATAACTTAACGCATGAAGACTC
CATCAAGTATAAGTACTTCTTGGAACTTGGCCGTATTGATTCCAGCACCAAGCCATGTCCTCAGTGCAAG
CACTTTACAACCTTCAAGAAAAAAGGACATATTCCCACCCCTTCCAGATCAGAAAGCAAATACAAAATCC
AGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTTAACTGCAA
GGAGTACAAAAAAGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGCC
CAGAAGTGTCCAAAGTGCAAGATCCACATCCAGCGAACTGAAGGATGTGACCATATGACCTGCTCACAAT
GTAACACTAATTTTTGTTACCGATGTGGTGAGAGATACCGCCAGCTCCGATTTTTTGGAGACCACACATC
AAACCTCAGTATATTTGGATGCAAATATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGA
GGGTCAGTCTGTGCTGGAAAATTATTCATTGCACCTCTAATTATGGTTTTGGGATTGGCACTAGGGGCCA
TAGCGGTTGTAATCGGTTTATTTGTATTTCCTATCTATTGCCTTTGTAAAAAACAGAGAAAACGATCACG
GACAGGTATGCACTGGTAA

Translation (542 aa):
MGEEQSTVSGGGGPQESQTLASGTAGHPEPPRPQGDSARAPPLRAASAEPSGGGCGSDWGCADTSAPEPA
RSLGPPGWSKSRAPAQPAGLALTGPLNPQTLPLQLELEEEEEEAGDRKEGGDEQQEAPPGEELEPRTRVG
AADGLVLDVLGQRRPSLAKRQVFCSVYCVESDLPEAPASEQLSPPASPPGAPPVLNPPSTRSSFPSPRLS
LPTDSLSPDGGSIELEFYLAPEPFSMPSLLGAPPYSGLGGVGDPYVPLMVLMCRVCLEDKPIKPLPCCKK
AVCEECLKVYLSAQVQLGQVEIKCPITECFEFLEETTVVYNLTHEDSIKYKYFLELGRIDSSTKPCPQCK
HFTTFKKKGHIPTPSRSESKYKIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHGQRNA
QKCPKCKIHIQRTEGCDHMTCSQCNTNFCYRCGERYRQLRFFGDHTSNLSIFGCKYRYLPERPHLRRLVR
GSVCAGKLFIAPLIMVLGLALGAIAVVIGLFVFPIYCLCKKQRKRSRTGMHW


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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