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Report for CCDS69349.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69349.1 Public Homo sapiens 7 ZKSCAN1 24 110 108 CCDS HistoryNCBI Gene:7586Re-query CCDS DB by CCDS ID:69349.1Re-query CCDS DB by GeneID:7586See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69349.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000426572.5 ENSP00000409172.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426572.5Link to Ensembl Protein Viewer:ENSP00000409172.1Re-query CCDS DB by Nucleotide ID:ENST00000426572Re-query CCDS DB by Protein ID:ENSP00000409172
Original member Current member EBI ENST00000620510.1 ENSP00000480305.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620510.1Link to Ensembl Protein Viewer:ENSP00000480305.1Re-query CCDS DB by Nucleotide ID:ENST00000620510Re-query CCDS DB by Protein ID:ENSP00000480305
Original member Current member NCBI NM_001287054.3 NP_001273983.1 Accepted alive Link to Nucleotide Sequence:NM_001287054.3Link to Protein Sequence:NP_001273983.1Re-query CCDS DB by Nucleotide ID:NM_001287054Re-query CCDS DB by Protein ID:NP_001273983Link to BLAST:NP_001273983.1
Original member Current member NCBI NM_001346580.2 NP_001333509.1 Accepted alive Link to Nucleotide Sequence:NM_001346580.2Link to Protein Sequence:NP_001333509.1Re-query CCDS DB by Nucleotide ID:NM_001346580Re-query CCDS DB by Protein ID:NP_001333509Link to BLAST:NP_001333509.1

Chromosomal Locations for CCDS 69349.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100023615 100023932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100024154 100024307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100029861 100029952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100030249 100030375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100033305 100034197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1584 nt):
ATGTGGGGGCAGGATTCCACCCTACAGGACACGCCTCCTCCAGACCCAGAGATATTCCGCCAACGCTTCA
GGCGCTTCTGTTACCAGAACACTTTTGGGCCCCGAGAGGCTCTCAGTCGGCTGAAGGAACTTTGTCATCA
GTGGCTGCGGCCAGAAATAAACACCAAGGAACAGATCCTGGAGCTTCTGGTGCTAGAGCAGTTTCTTTCC
ATCCTGCCCAAGGAGCTCCAGGTCTGGCTGCAGGAATACCGCCCCGATAGTGGAGAGGAGGCCGTGACCC
TTCTAGAAGACTTGGAGCTTGATTTATCAGGACAACAGGTCCCAGGTCAAGTTCATGGACCTGAGATGCT
CGCAAGGGGGATGGTGCCTCTGGATCCAGTTCAGGAGTCCTCGAGCTTTGACCTTCATCACGAGGCCACC
CAGTCCCACTTCAAACATTCGTCTCGGAAACCCCGCCTCTTACAGTCACGAGCTCTTCCTGCTGCCCACA
TTCCTGCACCCCCTCATGAGGGTAGTCCCAGAGACCAGGCGATGGCATCTGCACTATTCACAGCGGATTC
CCAGGCAATGGTGAAGATCGAGGACATGGCTGTGTCCCTCATTCTGGAGGAATGGGGATGTCAGAATCTG
GCTCGGAGGAATCTCAGTAGGGACAACAGGCAGGAGAATTATGGGAGCGCATTTCCCCAGGGTGGTGAAA
ACAGGAATGAGAACGAGGAGTCAACCTCAAAGGCTGAAACCTCGGAAGATTCAGCATCACGCGGGGAGAC
AACAGGAAGATCCCAGAAAGAGTTTGGAGAGAAACGTGACCAGGAGGGCAAAACAGGAGAAAGACAGCAG
AAAAACCCTGAGGAGAAAACCAGGAAAGAGAAAAGAGATTCAGGGCCAGCTATAGGAAAGGACAAAAAAA
CCATCACAGGAGAGAGAGGTCCAAGGGAGAAGGGGAAAGGATTGGGAAGAAGCTTCAGTCTGAGCTCCAA
CTTCACCACCCCTGAAGAAGTTCCCACGGGAACAAAGTCTCACAGATGTGATGAATGTGGTAAATGCTTC
ACGAGAAGTTCAAGCCTTATCCGCCATAAAATAATCCACACTGGAGAAAAGCCCTATGAATGTAGTGAGT
GTGGGAAAGCCTTCAGTCTTAACTCCAACCTTGTCCTGCATCAGAGGATCCACACAGGAGAGAAACCTCA
TGAATGTAACGAGTGTGGCAAGGCCTTCAGCCACAGTTCCAATCTCATCCTCCATCAGCGCATCCACTCT
GGAGAGAAACCTTATGAATGTAATGAGTGCGGGAAGGCCTTCAGCCAGAGCTCGGACCTCACCAAGCATC
AGAGAATTCACACGGGGGAGAAACCCTATGAATGTAGTGAATGTGGAAAAGCTTTCAACCGAAACTCATA
CCTGATTTTGCATCGGAGAATTCACACTCGAGAAAAGCCCTACAAGTGCACTAAGTGTGGCAAGGCCTTC
ACCCGCAGCTCCACCCTCACTCTGCATCACAGAATCCATGCCAGAGAGAGAGCCTCTGAGTACAGCCCAG
CCTCCCTTGATGCATTTGGCGCGTTCCTGAAAAGTTGTGTGTAA

Translation (527 aa):
MWGQDSTLQDTPPPDPEIFRQRFRRFCYQNTFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLS
ILPKELQVWLQEYRPDSGEEAVTLLEDLELDLSGQQVPGQVHGPEMLARGMVPLDPVQESSSFDLHHEAT
QSHFKHSSRKPRLLQSRALPAAHIPAPPHEGSPRDQAMASALFTADSQAMVKIEDMAVSLILEEWGCQNL
ARRNLSRDNRQENYGSAFPQGGENRNENEESTSKAETSEDSASRGETTGRSQKEFGEKRDQEGKTGERQQ
KNPEEKTRKEKRDSGPAIGKDKKTITGERGPREKGKGLGRSFSLSSNFTTPEEVPTGTKSHRCDECGKCF
TRSSSLIRHKIIHTGEKPYECSECGKAFSLNSNLVLHQRIHTGEKPHECNECGKAFSHSSNLILHQRIHS
GEKPYECNECGKAFSQSSDLTKHQRIHTGEKPYECSECGKAFNRNSYLILHRRIHTREKPYKCTKCGKAF
TRSSTLTLHHRIHARERASEYSPASLDAFGAFLKSCV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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