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Report for CCDS6983.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6983.1 Public Homo sapiens 9 FCN2 24 110 108 CCDS HistoryNCBI Gene:2220Re-query CCDS DB by CCDS ID:6983.1Re-query CCDS DB by GeneID:2220See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6983.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000291744.11 ENSP00000291744.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000291744.11Link to Ensembl Protein Viewer:ENSP00000291744.6Re-query CCDS DB by Nucleotide ID:ENST00000291744Re-query CCDS DB by Protein ID:ENSP00000291744
Original member Current member NCBI NM_004108.3 NP_004099.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004108.3Link to Protein Sequence:NP_004099.2Re-query CCDS DB by Nucleotide ID:NM_004108Re-query CCDS DB by Protein ID:NP_004099Link to BLAST:NP_004099.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004099.2 313 Q15485-1 313 100% 0 0

Chromosomal Locations for CCDS 6983.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 134880822 134880921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134882526 134882639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134883302 134883355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134884740 134884772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134885239 134885366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134885768 134885897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134886430 134886564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134887168 134887415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGAGCTGGACAGAGCTGTGGGGGTCCTGGGCGCTGCCACCCTGCTGCTCTCTTTCCTGGGCATGGCCT
GGGCTCTCCAGGCGGCAGACACCTGTCCAGAGGTGAAGATGGTGGGCCTGGAGGGCTCTGACAAGCTCAC
CATTCTCCGAGGCTGTCCGGGGCTGCCTGGGGCCCCTGGGCCCAAGGGAGAGGCAGGCACCAATGGAAAG
AGAGGAGAACGTGGCCCCCCTGGACCTCCTGGGAAGGCAGGACCACCTGGGCCCAACGGAGCACCTGGGG
AGCCCCAGCCGTGCCTGACAGGCCCGCGTACCTGCAAGGACCTGCTAGACCGAGGGCACTTCCTGAGCGG
CTGGCACACCATCTACCTGCCCGACTGCCGGCCCCTGACTGTGCTCTGTGACATGGACACGGACGGAGGG
GGCTGGACCGTTTTCCAGCGGAGGGTGGATGGCTCTGTGGACTTCTACCGGGACTGGGCCACGTACAAGC
AGGGCTTCGGCAGTCGGCTGGGGGAGTTCTGGCTGGGGAATGACAACATCCACGCCCTGACCGCCCAGGG
AACCAGCGAGCTCCGTGTAGACCTGGTGGACTTTGAGGACAACTACCAGTTTGCTAAGTACAGATCATTC
AAGGTGGCCGACGAGGCGGAGAAGTACAATCTGGTCCTGGGGGCCTTCGTGGAGGGCAGTGCGGGAGATT
CCCTGACGTTCCACAACAACCAGTCCTTCTCCACCAAAGACCAGGACAATGATCTTAACACCGGAAATTG
TGCTGTGATGTTTCAGGGAGCTTGGTGGTACAAAAACTGCCATGTGTCAAACCTGAATGGTCGCTACCTC
AGGGGGACTCATGGCAGCTTTGCAAATGGCATCAACTGGAAGTCGGGGAAAGGATACAATTATAGCTACA
AGGTGTCAGAGATGAAGGTGCGACCTGCCTAG

Translation (313 aa):
MELDRAVGVLGAATLLLSFLGMAWALQAADTCPEVKMVGLEGSDKLTILRGCPGLPGAPGPKGEAGTNGK
RGERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGG
GWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSF
KVADEAEKYNLVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYL
RGTHGSFANGINWKSGKGYNYSYKVSEMKVRPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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