NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS7007.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7007.1 Public Homo sapiens 9 TMEM141 24 110 108 CCDS HistoryNCBI Gene:85014Re-query CCDS DB by CCDS ID:7007.1Re-query CCDS DB by GeneID:85014See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7007.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000290079.9 ENSP00000290079.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000290079.9Link to Ensembl Protein Viewer:ENSP00000290079.8Re-query CCDS DB by Nucleotide ID:ENST00000290079Re-query CCDS DB by Protein ID:ENSP00000290079
Original member Current member NCBI NM_032928.4 NP_116317.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032928.4Link to Protein Sequence:NP_116317.1Re-query CCDS DB by Nucleotide ID:NM_032928Re-query CCDS DB by Protein ID:NP_116317Link to BLAST:NP_116317.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116317.1 108 Q96I45 108 100% 0 0

Chromosomal Locations for CCDS 7007.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 136791371 136791424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136791711 136791777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136791947 136792030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136792251 136792358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136792819 136792832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (327 nt):
ATGGTGAACTTGGGTCTGTCCCGGGTGGACGACGCCGTGGCTGCCAAGCACCCGGGACTCGGGGAGTATG
CCGCATGCCAGTCACACGCCTTCATGAAGGGCGTTTTCACCTTCGTCACAGGCACCGGCATGGCCTTTGG
CTTGCAGATGTTCATTCAGAGGAAGTTTCCATACCCTTTGCAGTGGAGCCTCCTAGTGGCCGTGGTTGCA
GGCTCTGTGGTCAGCTACGGGGTGACGAGAGTGGAGTCGGAGAAATGCAACAACCTCTGGCTCTTCCTGG
AGACCGGGCAGCTCCCCAAAGACAGGAGCACAGATCAGAGAAGCTAG

Translation (108 aa):
MVNLGLSRVDDAVAAKHPGLGEYAACQSHAFMKGVFTFVTGTGMAFGLQMFIQRKFPYPLQWSLLVAVVA
GSVVSYGVTRVESEKCNNLWLFLETGQLPKDRSTDQRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH