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Report for CCDS70679.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70679.1 Public Mus musculus 16 Nmral1 23 108 98 CCDS HistoryNCBI Gene:67824Re-query CCDS DB by CCDS ID:70679.1Re-query CCDS DB by GeneID:67824See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70679.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115851.9 ENSMUSP00000111517.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115851.9Link to Ensembl Protein Viewer:ENSMUSP00000111517.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000115851Re-query CCDS DB by Protein ID:ENSMUSP00000111517
Original member Current member NCBI NM_001290762.1 NP_001277691.1 Accepted alive Link to Nucleotide Sequence:NM_001290762.1Link to Protein Sequence:NP_001277691.1Re-query CCDS DB by Nucleotide ID:NM_001290762Re-query CCDS DB by Protein ID:NP_001277691Link to BLAST:NP_001277691.1

Chromosomal Locations for CCDS 70679.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4711525 4711680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4713640 4713830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4714417 4714666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4716297 4716535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4718895 4718934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGGCTGATAGGAAACTGGTGGTGGTTTTTGGAGCCACAGGTGCGCAAGGTGGCTCTGTGGCCCGTGCAT
TGCTAGAAGATGGGACATTCAGGATTCGAGTGGTAACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCT
GAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGACGATGCAGCTAGCATGGAGCTGGCCTTGGCT
GGAGCCCATGCCACCTTCATTGTGACCAATTACTGGGAGACGTGCAGCCAGGACCGAGAAGTGCAGCAGG
GCAAGCTTCTAGCCGATCTAGCCAAACGCTTGGGCCTCCATTATGTAGTGTACAGTGGCCTGGAGAACAT
CAGGAAGCTGACGGCTGGGAAGCTGGCCGCAGGACACTTTGATGGCAAAGGGGAGGTGGAGGAATACTTC
CGAGACATCGGTGTTCCCATGACCAGTGTGCGGCTGCCTTGCTATTTCGAGAATCTCCTTTCCTATTTCC
TGCCCCAGAAAGCTGCAGATGGAAAAAGCTTCTTGCTGGACTTGCCCATGGGTGACGTCCCCATGGATGG
AATGTCTGTGAGTGACCTGGGCCCCGTGGTGCTCAGCTTGCTGAAGAAGCCAGAAGAGTACGTAGGGCAG
AACATCGGGCTCAGTACCTGCAGGCACACCGCAGAGGAGTATGCTGCCTTGCTTAGCAAGCACACTGGCA
AGGCTGTACATCATGCCAAGGACTCTGGAGGAAGCCAGTCTTCCTGGCATCACCAAGGCTGTAGAGGAGA
CAGACATGGTGGATTCTCTGTTTCCAGACAACTCCTGAGGATTACGAGAAACTTGGTTTCCAGGGGGCTC
AAGACTTGGCCAACATGTTCCGTTTCTACACCCTGA

Translation (291 aa):
MADRKLVVVFGATGAQGGSVARALLEDGTFRIRVVTRNPEQRAAKELKQQGAEVVRGDQDDAASMELALA
GAHATFIVTNYWETCSQDREVQQGKLLADLAKRLGLHYVVYSGLENIRKLTAGKLAAGHFDGKGEVEEYF
RDIGVPMTSVRLPCYFENLLSYFLPQKAADGKSFLLDLPMGDVPMDGMSVSDLGPVVLSLLKKPEEYVGQ
NIGLSTCRHTAEEYAALLSKHTGKAVHHAKDSGGSQSSWHHQGCRGDRHGGFSVSRQLLRITRNLVSRGL
KTWPTCSVSTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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