NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS7097.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7097.1 Public Homo sapiens 10 PHYH 24 110 108 CCDS HistoryNCBI Gene:5264Re-query CCDS DB by CCDS ID:7097.1Re-query CCDS DB by GeneID:5264See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7097.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263038.9 ENSP00000263038.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263038.9Link to Ensembl Protein Viewer:ENSP00000263038.4Re-query CCDS DB by Nucleotide ID:ENST00000263038Re-query CCDS DB by Protein ID:ENSP00000263038
Original member Current member NCBI NM_006214.4 NP_006205.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006214.4Link to Protein Sequence:NP_006205.1Re-query CCDS DB by Nucleotide ID:NM_006214Re-query CCDS DB by Protein ID:NP_006205Link to BLAST:NP_006205.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006205.1 338 O14832-1 338 100% 0 0

Chromosomal Locations for CCDS 7097.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 13278301 13278354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13280976 13281110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13283690 13283839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13288360 13288541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13291831 13291912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13294428 13294596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13295496 13295606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13298187 13298245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13299968 13300042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1017 nt):
ATGGAGCAGCTTCGCGCCGCCGCCCGTCTGCAGATTGTTCTGGGCCACCTCGGCCGCCCCTCGGCCGGGG
CTGTCGTAGCTCATCCCACTTCAGGGACTATTTCCTCTGCCAGTTTCCATCCTCAACAATTCCAGTATAC
TCTGGATAATAACGTTCTAACCCTGGAACAGAGAAAATTTTATGAAGAAAATGGGTTTCTAGTAATCAAA
AATCTTGTACCTGATGCCGATATTCAACGCTTTCGGAATGAGTTTGAAAAAATCTGCAGAAAGGAGGTGA
AACCATTAGGATTAACAGTAATGAGAGATGTGACCATTTCGAAATCCGAATATGCTCCAAGTGAGAAGAT
GATCACGAAGGTCCAGGATTTCCAGGAAGATAAGGAGCTCTTCAGATACTGCACTCTCCCCGAGATTCTG
AAATATGTGGAGTGCTTCACTGGACCTAATATTATGGCCATGCACACAATGTTGATAAACAAACCTCCAG
ATTCTGGCAAGAAGACGTCCCGTCACCCCCTGCACCAGGACCTGCACTATTTCCCCTTCAGGCCCAGCGA
TCTCATCGTTTGCGCCTGGACGGCGATGGAGCACATCAGCCGGAACAACGGCTGTCTGGTTGTGCTCCCA
GGCACACACAAGGGCTCCCTGAAGCCCCACGATTACCCCAAGTGGGAGGGGGGAGTTAACAAAATGTTCC
ACGGGATCCAGGACTACGAGGAAAACAAGGCCCGGGTGCACCTGGTGATGGAGAAGGGCGACACTGTTTT
CTTCCATCCTTTGCTCATCCACGGATCTGGTCAGAATAAAACCCAGGGATTCCGGAAGGCAATTTCCTGC
CATTTCGCCAGTGCCGATTGCCACTACATTGACGTGAAGGGCACCAGTCAAGAAAACATCGAGAAGGAAG
TTGTAGGAATAGCACATAAATTCTTTGGAGCTGAAAATAGCGTGAACTTGAAGGATATTTGGATGTTTCG
AGCTCGACTTGTGAAAGGAGAAAGAACCAATCTTTGA

Translation (338 aa):
MEQLRAAARLQIVLGHLGRPSAGAVVAHPTSGTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIK
NLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEIL
KYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLP
GTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISC
HFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH