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Report for CCDS7137.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7137.1 Public Homo sapiens 10 COMMD3 24 110 108 CCDS HistoryNCBI Gene:23412Re-query CCDS DB by CCDS ID:7137.1Re-query CCDS DB by GeneID:23412See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7137.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376836.8 ENSP00000366032.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376836.8Link to Ensembl Protein Viewer:ENSP00000366032.3Re-query CCDS DB by Nucleotide ID:ENST00000376836Re-query CCDS DB by Protein ID:ENSP00000366032
Original member Current member NCBI NM_012071.4 NP_036203.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012071.4Link to Protein Sequence:NP_036203.1Re-query CCDS DB by Nucleotide ID:NM_012071Re-query CCDS DB by Protein ID:NP_036203Link to BLAST:NP_036203.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036203.1 195 Q9UBI1 195 100% 0 0

Chromosomal Locations for CCDS 7137.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 22316418 22316556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22317884 22317995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22318105 22318168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22318272 22318306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22318653 22318713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22318806 22318862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22318959 22319018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22319939 22319998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (588 nt):
ATGGAGCTCTCGGAGTCTGTGCAGAAAGGCTTCCAGATGCTGGCGGATCCCCGCTCCTTCGACTCCAACG
CCTTCACGCTTCTCCTCCGGGCGGCATTCCAGAGTCTGCTGGACGCCCAGGCGGACGAGGCCGTGTTAGA
TCATCCAGACTTGAAACATATCGACCCAGTGGTTTTAAAACATTGTCATGCAGCAGCTGCAACTTACATA
CTAGAGGCAGGAAAGCACCGAGCTGACAAGTCAACTCTAAGCACTTATCTAGAAGACTGTAAATTTGACA
GAGAGCGAATAGAACTGTTTTGCACGGAATATCAGAATAATAAGAATTCCCTAGAAATCCTACTGGGAAG
TATAGGCAGATCTCTCCCTCATATAACGGATGTTTCTTGGCGCTTGGAATATCAGATAAAGACCAATCAA
CTTCATAGGATGTACAGACCTGCATATTTGGTGACCTTAAGTGTACAGAACACTGATTCCCCATCCTATC
CAGAGATTAGTTTTAGTTGCAGCATGGAACAATTACAGGACTTGGTGGGGAAACTTAAAGATGCTTCGAA
AAGCCTGGAAAGAGCAACTCAGTTGTAA

Translation (195 aa):
MELSESVQKGFQMLADPRSFDSNAFTLLLRAAFQSLLDAQADEAVLDHPDLKHIDPVVLKHCHAAAATYI
LEAGKHRADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVSWRLEYQIKTNQ
LHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQDLVGKLKDASKSLERATQL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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