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Report for CCDS7189.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7189.1 Public Homo sapiens 10 CCNY 24 110 108 CCDS HistoryNCBI Gene:219771Re-query CCDS DB by CCDS ID:7189.1Re-query CCDS DB by GeneID:219771See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7189.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374704.8 ENSP00000363836.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374704.8Link to Ensembl Protein Viewer:ENSP00000363836.4Re-query CCDS DB by Nucleotide ID:ENST00000374704Re-query CCDS DB by Protein ID:ENSP00000363836
Original member Current member NCBI NM_145012.6 NP_659449.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145012.6Link to Protein Sequence:NP_659449.3Re-query CCDS DB by Nucleotide ID:NM_145012Re-query CCDS DB by Protein ID:NP_659449Link to BLAST:NP_659449.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659449.3 341 Q8ND76-1 341 100% 0 0

Chromosomal Locations for CCDS 7189.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 35337054 35337207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35483404 35483478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35501501 35501535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35516523 35516623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35525964 35525999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35529973 35530030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35530124 35530243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35553019 35553185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35566023 35566185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35569054 35569170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGGGGAACACTACCTCGTGCTGCGTGTCGTCCAGTCCCAAGCTCCGGAGGAATGCCCACTCCCGGCTGG
AGTCCTACCGGCCAGACACGGACCTGAGCCGCGAGGACACGGGCTGCAACCTGCAGCACATCAGCGACCG
GGAGAACATAGACGATTTGAACATGGAATTCAATCCTTCAGATCATCCTCGGGCCAGCACAATATTCCTC
AGTAAATCTCAGACGGACGTGAGAGAAAAACGCAAGAGTCTCTTCATTAACCATCATCCTCCAGGACAAA
TAGCAAGGAAATACAGTTCCTGCTCCACCATTTTCCTAGATGATAGCACAGTCAGTCAACCAAACCTCAA
GTATACAATTAAATGTGTCGCTCTTGCAATATATTATCACATCAAAAACAGGGACCCAGATGGAAGGATG
CTCTTAGATATTTTTGATGAAAATCTTCACCCTCTTTCGAAATCCGAAGTGCCACCAGATTATGACAAAC
ACAACCCAGAGCAGAAGCAGATTTACCGGTTCGTTCGGACACTGTTCAGTGCTGCTCAGCTGACGGCTGA
ATGTGCCATCGTCACCCTGGTGTACCTTGAAAGACTTTTAACATACGCAGAGATAGATATCTGTCCGGCC
AACTGGAAGCGGATTGTTTTAGGGGCGATCCTGCTGGCCTCCAAGGTGTGGGATGACCAGGCTGTATGGA
ATGTGGATTACTGCCAGATCCTGAAAGACATCACGGTGGAGGACATGAACGAGCTAGAGCGACAGTTTCT
TGAATTGCTGCAGTTCAACATCAATGTTCCTTCCAGTGTCTATGCCAAGTATTATTTTGATCTTCGTTCT
CTGGCAGAAGCGAACAACCTGAGCTTTCCCTTGGAGCCCCTGAGCAGGGAGAGGGCTCACAAGCTTGAGG
CCATCTCTCGCCTCTGCGAGGACAAGTACAAGGACCTAAGAAGATCCGCGAGGAAGCGCTCAGCCAGTGC
AGACAACCTGACTCTGCCCCGGTGGTCCCCAGCCATCATCTCTTAA

Translation (341 aa):
MGNTTSCCVSSSPKLRRNAHSRLESYRPDTDLSREDTGCNLQHISDRENIDDLNMEFNPSDHPRASTIFL
SKSQTDVREKRKSLFINHHPPGQIARKYSSCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRM
LLDIFDENLHPLSKSEVPPDYDKHNPEQKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPA
NWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRS
LAEANNLSFPLEPLSRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLPRWSPAIIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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