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Report for CCDS721.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
721.1 Public Homo sapiens 1 GBP4 24 110 108 CCDS HistoryNCBI Gene:115361Re-query CCDS DB by CCDS ID:721.1Re-query CCDS DB by GeneID:115361See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 721.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355754.7 ENSP00000359490.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355754.7Link to Ensembl Protein Viewer:ENSP00000359490.5Re-query CCDS DB by Nucleotide ID:ENST00000355754Re-query CCDS DB by Protein ID:ENSP00000359490
Original member Current member NCBI NM_052941.5 NP_443173.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052941.5Link to Protein Sequence:NP_443173.2Re-query CCDS DB by Nucleotide ID:NM_052941Re-query CCDS DB by Protein ID:NP_443173Link to BLAST:NP_443173.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443173.2 640 Q96PP9 640 100% 0 0

Chromosomal Locations for CCDS 721.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 89185254 89185469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89186333 89186526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89187000 89187102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89188582 89188794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89190038 89190318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89191261 89191506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89192904 89193100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89193303 89193412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89195297 89195424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89197110 89197304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89198795 89198834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1923 nt):
ATGGGTGAGAGAACTCTTCACGCTGCAGTGCCCACACCAGGTTATCCAGAATCTGAATCCATCATGATGG
CCCCCATTTGTCTAGTGGAAAACCAGGAAGAGCAGCTGACAGTGAATTCAAAGGCATTAGAGATTCTTGA
CAAGATTTCTCAGCCCGTGGTGGTGGTGGCCATTGTAGGGCTATACCGCACAGGAAAATCCTATCTCATG
AATCGTCTTGCAGGAAAGCGCAATGGCTTCCCTCTGGGCTCCACGGTGCAGTCTGAAACTAAGGGCATCT
GGATGTGGTGTGTGCCCCACCTCTCTAAGCCAAACCACACCCTGGTCCTTCTGGACACCGAGGGCCTGGG
CGATGTAGAAAAGAGTAACCCTAAGAATGACTCGTGGATCTTTGCCCTGGCTGTGCTTCTAAGCAGCAGC
TTTGTCTATAACAGCGTGAGCACCATCAACCACCAGGCCCTGGAGCAGCTGCACTATGTGACTGAGCTAG
CAGAGCTAATCAGGGCAAAATCCTGCCCCAGACCTGATGAAGCTGAGGACTCCAGCGAGTTTGCGAGTTT
CTTTCCAGACTTTATTTGGACTGTTCGGGATTTTACCCTGGAGCTAAAGTTAGATGGAAACCCCATCACA
GAAGATGAGTACCTGGAGAATGCCTTGAAGCTGATTCCAGGCAAGAATCCCAAAATTCAAAATTCAAACA
TGCCTAGAGAGTGTATCAGGCATTTCTTCCGAAAACGGAAGTGCTTTGTCTTTGACCGGCCTACAAATGA
CAAGCAATATTTAAATCATATGGACGAAGTGCCAGAAGAAAATCTGGAAAGGCATTTCCTTATGCAATCA
GACAACTTCTGTTCTTATATCTTCACCCATGCAAAGACCAAGACCCTGAGAGAGGGAATCATTGTCACTG
GAAAGCGGCTGGGGACTCTGGTGGTGACTTATGTAGATGCCATCAACAGTGGAGCAGTACCTTGTCTGGA
GAATGCAGTGACAGCACTGGCCCAGCTTGAGAACCCAGCGGCTGTGCAGAGGGCAGCCGACCACTATAGC
CAGCAGATGGCCCAGCAACTGAGGCTCCCCACAGACACGCTCCAGGAGCTGCTGGACGTGCATGCAGCCT
GTGAGAGGGAAGCCATTGCAGTCTTCATGGAGCACTCCTTCAAGGATGAAAACCATGAATTCCAGAAGAA
GCTTGTGGACACCATAGAGAAAAAGAAGGGAGACTTTGTGCTGCAGAATGAAGAGGCATCTGCCAAATAT
TGCCAGGCTGAGCTTAAGCGGCTTTCAGAGCACCTGACAGAAAGCATTTTGAGAGGAATTTTCTCTGTTC
CTGGAGGACACAATCTCTACTTAGAAGAAAAGAAACAGGTTGAGTGGGACTATAAGCTAGTGCCCAGAAA
AGGAGTTAAGGCAAACGAGGTCCTCCAGAACTTCCTGCAGTCACAGGTGGTTGTAGAGGAATCCATCCTG
CAGTCAGACAAAGCCCTCACTGCTGGAGAGAAGGCCATAGCAGCGGAGCGGGCCATGAAGGAAGCAGCTG
AGAAGGAACAGGAGCTGCTAAGAGAAAAACAGAAGGAGCAGCAGCAAATGATGGAGGCTCAAGAGAGAAG
CTTCCAGGAATACATGGCCCAAATGGAGAAGAAGTTGGAGGAGGAAAGGGAAAACCTTCTCAGAGAGCAT
GAAAGGCTGCTAAAACACAAGCTGAAGGTACAAGAAGAAATGCTTAAGGAAGAATTTCAAAAGAAATCTG
AGCAGTTAAATAAAGAGATTAATCAACTGAAAGAAAAAATTGAAAGCACTAAAAATGAACAGTTAAGGCT
CTTAAAGATCCTTGACATGGCTAGCAACATAATGATTGTCACTCTACCTGGGGCTTCCAAGCTACTTGGA
GTAGGGACAAAATATCTTGGCTCACGTATTTAA

Translation (640 aa):
MGERTLHAAVPTPGYPESESIMMAPICLVENQEEQLTVNSKALEILDKISQPVVVVAIVGLYRTGKSYLM
NRLAGKRNGFPLGSTVQSETKGIWMWCVPHLSKPNHTLVLLDTEGLGDVEKSNPKNDSWIFALAVLLSSS
FVYNSVSTINHQALEQLHYVTELAELIRAKSCPRPDEAEDSSEFASFFPDFIWTVRDFTLELKLDGNPIT
EDEYLENALKLIPGKNPKIQNSNMPRECIRHFFRKRKCFVFDRPTNDKQYLNHMDEVPEENLERHFLMQS
DNFCSYIFTHAKTKTLREGIIVTGKRLGTLVVTYVDAINSGAVPCLENAVTALAQLENPAAVQRAADHYS
QQMAQQLRLPTDTLQELLDVHAACEREAIAVFMEHSFKDENHEFQKKLVDTIEKKKGDFVLQNEEASAKY
CQAELKRLSEHLTESILRGIFSVPGGHNLYLEEKKQVEWDYKLVPRKGVKANEVLQNFLQSQVVVEESIL
QSDKALTAGEKAIAAERAMKEAAEKEQELLREKQKEQQQMMEAQERSFQEYMAQMEKKLEEERENLLREH
ERLLKHKLKVQEEMLKEEFQKKSEQLNKEINQLKEKIESTKNEQLRLLKILDMASNIMIVTLPGASKLLG
VGTKYLGSRI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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