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Report for CCDS7254.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7254.1 Public Homo sapiens 10 PHYHIPL 24 110 108 CCDS HistoryNCBI Gene:84457Re-query CCDS DB by CCDS ID:7254.1Re-query CCDS DB by GeneID:84457See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7254.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373880.9 ENSP00000362987.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373880.9Link to Ensembl Protein Viewer:ENSP00000362987.4Re-query CCDS DB by Nucleotide ID:ENST00000373880Re-query CCDS DB by Protein ID:ENSP00000362987
Original member Current member NCBI NM_032439.4 NP_115815.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032439.4Link to Protein Sequence:NP_115815.2Re-query CCDS DB by Nucleotide ID:NM_032439Re-query CCDS DB by Protein ID:NP_115815Link to BLAST:NP_115815.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115815.2 376 Q96FC7-1 376 100% 0 0

Chromosomal Locations for CCDS 7254.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 59176854 59176959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 59234304 59234500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 59236483 59236657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 59238588 59238705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 59245057 59245591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGGAGGTGCCGCGCCTGGATCATGCCCTCAACAGCCCCACCAGCCCCTGTGAGGAGGTGATCAAAAACC
TCAGCCTGGAGGCCATTCAGCTGTGCGACCGGGACGGGAACAAATCACAAGACAGTGGCATAGCAGAGAT
GGAAGAACTTCCTGTACCACATAACATCAAAATAAGCAATATAACGTGTGACTCATTCAAGATTTCATGG
GAAATGGATTCAAAATCAAAGGATCGCATTACACACTATTTTATTGACCTCAACAAGAAAGAGAACAAGA
ACTCCAATAAATTTAAACACAAGGATGTTCCCACAAAATTGGTGGCAAAAGCTGTTCCCTTGCCTATGAC
TGTCCGTGGACACTGGTTTTTAAGCCCAAGAACTGAATATACAGTAGCAGTGCAGACTGCCTCAAAACAA
GTTGATGGTGATTATGTTGTGTCTGAATGGAGTGAAATTATAGAATTCTGCACCGCAGACTATTCAAAAG
TTCATCTAACACAATTGTTGGAGAAGGCTGAAGTGATTGCAGGACGCATGCTTAAGTTTTCTGTTTTTTA
TCGTAATCAGCACAAAGAATATTTTGACTATGTTCGAGAACATCATGGGAATGCTATGCAGCCATCTGTC
AAGGATAACAGTGGTAGCCATGGCTCTCCTATCAGTGGAAAATTAGAAGGCATCTTCTTCAGCTGCAGCA
CTGAATTCAATACTGGAAAGCCACCCCAGGATTCACCTTATGGAAGATACAGGTTTGAGATTGCCGCAGA
AAAACTTTTTAACCCCAATACTAACTTATACTTTGGGGACTTCTACTGTATGTACACTGCTTATCATTAT
GTGATTCTTGTTATTGCTCCTGTGGGATCACCAGGAGATGAATTTTGTAAGCAGCGCCTTCCTCAACTAA
ATTCTAAGGATAATAAATTTTTGACCTGTACAGAAGAAGATGGGGTGCTGGTTTACCACCATGCCCAGGA
TGTCATTTTAGAAGTCATTTACACTGACCCTGTGGATCTTTCTGTGGGCACCGTGGCAGAAATCACTGGT
CATCAGCTCATGAGTTTGTCTACTGCAAATGCAAAGAAAGATCCCAGCTGCAAAACCTGTAATATCAGTG
TTGGACGTTAA

Translation (376 aa):
MEVPRLDHALNSPTSPCEEVIKNLSLEAIQLCDRDGNKSQDSGIAEMEELPVPHNIKISNITCDSFKISW
EMDSKSKDRITHYFIDLNKKENKNSNKFKHKDVPTKLVAKAVPLPMTVRGHWFLSPRTEYTVAVQTASKQ
VDGDYVVSEWSEIIEFCTADYSKVHLTQLLEKAEVIAGRMLKFSVFYRNQHKEYFDYVREHHGNAMQPSV
KDNSGSHGSPISGKLEGIFFSCSTEFNTGKPPQDSPYGRYRFEIAAEKLFNPNTNLYFGDFYCMYTAYHY
VILVIAPVGSPGDEFCKQRLPQLNSKDNKFLTCTEEDGVLVYHHAQDVILEVIYTDPVDLSVGTVAEITG
HQLMSLSTANAKKDPSCKTCNISVGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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