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Report for CCDS72732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72732.1 Public Homo sapiens 1 CNKSR1 24 110 108 CCDS HistoryNCBI Gene:10256Re-query CCDS DB by CCDS ID:72732.1Re-query CCDS DB by GeneID:10256See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72732.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374253.9 ENSP00000363371.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374253.9Link to Ensembl Protein Viewer:ENSP00000363371.5Re-query CCDS DB by Nucleotide ID:ENST00000374253Re-query CCDS DB by Protein ID:ENSP00000363371
Original member Current member NCBI NM_001297647.2 NP_001284576.1 Accepted alive Link to Nucleotide Sequence:NM_001297647.2Link to Protein Sequence:NP_001284576.1Re-query CCDS DB by Nucleotide ID:NM_001297647Re-query CCDS DB by Protein ID:NP_001284576Link to BLAST:NP_001284576.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284576.1 720 Q969H4-1 720 100% 0 0

Chromosomal Locations for CCDS 72732.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 26177548 26177599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26180453 26180610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26180715 26180896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26181857 26181941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26182361 26182402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26182480 26182584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26183197 26183256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26183346 26183435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26183729 26183830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26184071 26184141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26184214 26184287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26184401 26184507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26184585 26184612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26185014 26185186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26187168 26187241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26187411 26187482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26188234 26188307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26188442 26188503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26188598 26188697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26188772 26188953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26189279 26189548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2163 nt):
ATGGAACCGGTAGAGACCTGGACCCCCGGAAAGGTGGCAACTTGGCTGAGAGGTCTTGACGACTCCCTGC
AGGACTATCCCTTTGAGGACTGGCAGCTGCCTGGCAAGAACCTGCTCCAGCTCTGCCCCCAAAGCCTCGA
GGCTCTGGCTGTGCGGTCTCTGGGACACCAGGAGCTCATCCTGGGCGGGGTGGAACAGCTCCAGGCCCTG
AGCTCCAGGCTACAGACAGAGAACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGCAACCCATGACTTCC
AGAGCATAGTCCAAGGCTGCCTGGGGGACTGTGCCAAGACCCCTATTGATGTCCTCTGTGCAGCTGTGGA
GCTGTTGCATGAAGCTGACGCCCTCCTCTTCTGGCTCAGCAGGTACCTCTTCTCCCACTTAAATGATTTC
TCAGCATGCCAGGAGATCCGAGACTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGCGG
CTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGATCTGCCACAACATCCTGGTCTG
CTGCCCCAAGGAGCTGCTGGAACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGGGCCTA
GAAATTCACACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTTCCCACTGACTCCC
GACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGCGTGAGGAGAGGGA
CATGGTGGGATGGCCCCGTAAGAACATGGTGAGGGAACTGCTGCGGGAGCCAGCCGGACTCAGCTTAGTG
CTGAAGAAGATCCCGATACCGGAGACCCCCCCACAGACGCCCCCTCAGGTCCTGGACTCCCCGCACCAGA
GGAGCCCATCACTGTCTCTGGCCCCACTGTCTCCCAGGGCCCCATCTGAAGACGTCTTTGCCTTTGACCT
GTCTTCAAACCCCAGTCCCGGACCCAGCCCTGCCTGGACAGACTCTGCCTCCCTTGGCCCTGAGCCCCTG
CCCATCCCCCCGGAACCCCCAGCCATACTCCCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCC
CTGACAAGAGTCCTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACCCGGCTGAGCCGCCGGCGGGTGTC
ATGCCGTGAGCTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATG
GGCCCGCGCTGGCGCCGCCGCTGGTTTGTGCTCAAGGGACACACGCTCTACTGGTACCGCCAGCCCCAGG
ATGAGAAGGCTGAGGGCCTCATCAATGTCTCCAACTATAGTCTGGAAAGTGGACATGATCAGAAGAAGAA
ATATGTGTTTCAGCTCACCCATGATGTGTACAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCTG
AGCATGTGGGTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGCCCCCCCACCCC
GAGAGGAAGACTGCTACAGTGAGACCGAAGCAGAGGACCCGGACGATGAGGCTGGGTCCCACTCAGCCTC
GCCCAGCCCTGCTCAAGCTGGGAGTCCCCTCCATGGAGACACATCACCTGCAGCCACCCCCACACAGCGC
AGCCCACGGACCTCCTTTGGCTCTCTGACAGACAGCAGTGAAGAGGCACTGGAAGGAATGGTACGGGGGC
TGAGGCAGGGTGGCGTGTCCCTCCTAGGCCAGCCACAGCCCCTGACCCAGGAACAGTGGCGGAGCTCTTT
CATGCGGCGCAACCGAGACCCTCAGCTCAATGAGCGAGTGCACCGTGTGCGGGCGCTACAGAGCACACTC
AAGGCAAAGCTGCAGGAGCTGCAGGTCCTAGAAGAAGTGCTGGGTGACCCTGAGCTGACAGGAGAGAAGT
TCCGCCAGTGGAAGGAGCAGAACCGGGAGCTGTACTCAGAGGGCCTGGGGGCCTGGGGAGTGGCACAGGC
TGAAGGCAGCTCCCACATCTTGACCTCTGACTCCACAGAACAGTCCCCCCACTCCCTGCCCTCTGACCCT
GAAGAGCACTCCCATCTCTGCCCCCTGACCTCAGAGAGCAGCCTCCGACCTCCTGACCTCTGA

Translation (720 aa):
MEPVETWTPGKVATWLRGLDDSLQDYPFEDWQLPGKNLLQLCPQSLEALAVRSLGHQELILGGVEQLQAL
SSRLQTENLQSLTEGLLGATHDFQSIVQGCLGDCAKTPIDVLCAAVELLHEADALLFWLSRYLFSHLNDF
SACQEIRDLLEELSQVLHEDGPAAEKEGTVLRICSHVAGICHNILVCCPKELLEQKAVLEQVQLDSPLGL
EIHTTSNCQHFVSQVDTQVPTDSRLQIQPGDEVVQINEQVVVREERDMVGWPRKNMVRELLREPAGLSLV
LKKIPIPETPPQTPPQVLDSPHQRSPSLSLAPLSPRAPSEDVFAFDLSSNPSPGPSPAWTDSASLGPEPL
PIPPEPPAILPAGVAGTPGLPESPDKSPVGRKKSKGLATRLSRRRVSCRELGRPDCDGWLLLRKAPGGFM
GPRWRRRWFVLKGHTLYWYRQPQDEKAEGLINVSNYSLESGHDQKKKYVFQLTHDVYKPFIFAADTLTDL
SMWVRHLITCISKYQSPGRAPPPREEDCYSETEAEDPDDEAGSHSASPSPAQAGSPLHGDTSPAATPTQR
SPRTSFGSLTDSSEEALEGMVRGLRQGGVSLLGQPQPLTQEQWRSSFMRRNRDPQLNERVHRVRALQSTL
KAKLQELQVLEEVLGDPELTGEKFRQWKEQNRELYSEGLGAWGVAQAEGSSHILTSDSTEQSPHSLPSDP
EEHSHLCPLTSESSLRPPDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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