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Report for CCDS7287.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7287.1 Public Homo sapiens 10 SUPV3L1 24 110 108 CCDS HistoryNCBI Gene:6832Re-query CCDS DB by CCDS ID:7287.1Re-query CCDS DB by GeneID:6832See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7287.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359655.9 ENSP00000352678.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359655.9Link to Ensembl Protein Viewer:ENSP00000352678.4Re-query CCDS DB by Nucleotide ID:ENST00000359655Re-query CCDS DB by Protein ID:ENSP00000352678
Original member Current member NCBI NM_003171.5 NP_003162.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003171.5Link to Protein Sequence:NP_003162.2Re-query CCDS DB by Nucleotide ID:NM_003171Re-query CCDS DB by Protein ID:NP_003162Link to BLAST:NP_003162.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003162.2 786 Q8IYB8 786 100% 0 0

Chromosomal Locations for CCDS 7287.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 69180292 69180562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69185987 69186064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69186443 69186550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69187642 69187756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69189267 69189435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69191655 69191766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69195188 69195265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69196992 69197083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69198372 69198552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69199104 69199197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69200280 69200499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69202439 69202519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69202867 69203043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69207793 69207941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69208600 69209035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2361 nt):
ATGTCCTTCTCCCGTGCCCTATTGTGGGCTCGGCTCCCGGCGGGGCGCCAGGCTGGCCACCGGGCAGCCA
TCTGCTCTGCCCTTCGTCCCCACTTTGGGCCCTTTCCCGGGGTTCTGGGGCAAGTTTCTGTCCTTGCCAC
CGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCCCTGACTGTGAAA
CCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTCTGGACAAGAATGAAGTAA
AGAAGGTCTTAGACAAATTTTACAAGAGGAAAGAAATTCAGAAACTGGGTGCTGATTATGGACTTGATGC
TCGTCTCTTCCACCAAGCTTTCATAAGCTTTAGAAATTATATTATGCAGTCTCATTCCCTGGATGTGGAC
ATTCACATTGTTTTGAATGATATTTGCTTCGGTGCAGCTCATGCGGATGATTTATTCCCATTTTTCTTGA
GACATGCCAAACAAATATTTCCTGTGTTGGACTGTAAGGATGATCTACGTAAAATCAGTGACTTAAGAAT
ACCACCTAACTGGTACCCAGATGCTAGAGCCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAAC
AGTGGAAAGACTTATCACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAA
AATTACTGGCACATGAGATCTTCGAAAAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACAGGTGA
AGAGCGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAGATGTGCAGT
GTTACAACTCCTTATGAAGTGGCTGTAATTGATGAAATTCAAATGATTAGAGATCCAGCCAGAGGATGGG
CCTGGACCAGAGCACTTCTAGGACTGTGTGCTGAAGAGGTTCATTTGTGTGGAGAACCTGCTGCTATTGA
CCTGGTGATGGAGCTTATGTACACAACGGGGGAGGAAGTGGAGGTTCGAGACTATAAGAGGCTTACCCCC
ATTTCTGTGCTGGACCATGCACTAGAATCTTTAGATAACCTTCGGCCTGGGGACTGCATTGTCTGTTTTA
GCAAGAATGATATTTATTCTGTGAGTCGGCAGATTGAAATTCGGGGATTAGAATCAGCTGTTATATATGG
CAGTCTCCCACCTGGGACCAAACTTGCTCAAGCAAAAAAGTTTAATGATCCCAATGACCCATGCAAAATC
TTGGTTGCTACAGATGCAATTGGCATGGGACTTAATTTGAGCATAAGGAGAATTATTTTTTACTCCCTTA
TAAAGCCCAGTATCAATGAAAAGGGAGAGAGAGAACTAGAACCAATCACAACCTCTCAAGCCCTGCAGAT
TGCTGGCAGAGCTGGCAGATTCAGCTCACGGTTTAAAGAAGGAGAGGTTACAACAATGAATCATGAAGAT
CTCAGTTTATTAAAGGAAATTTTGAAGAGGCCTGTGGATCCTATAAGGGCAGCTGGTCTTCATCCAACTG
CTGAGCAGATTGAAATGTTTGCCTACCATCTCCCTGATGCAACACTGTCCAATCTCATTGATATTTTTGT
AGACTTTTCACAAGTTGATGGGCAGTATTTTGTCTGCAATATGGATGATTTTAAATTTTCTGCAGAGTTG
ATCCAGCATATTCCACTAAGTCTGCGAGTGAGGTATGTTTTCTGCACAGCTCCTATCAACAAGAAGCAGC
CTTTTGTGTGTTCTTCACTGTTACAGTTTGCCAGGCAGTATAGCAGGAATGAGCCCCTGACCTTTGCATG
GTTACGCCGATACATCAAATGGCCTTTACTTCCACCTAAGAATATTAAAGACCTCATGGATCTTGAAGCT
GTCCACGATGTCTTGGATCTTTACTTGTGGCTAAGCTACCGATTTATGGATATGTTTCCAGATGCCAGCC
TTATTCGAGATCTCCAGAAAGAACTAGATGGTATTATCCAAGATGGTGTGCACAATATCACTAAATTGAT
TAAAATGTCTGAGACGCATAAGCTGTTGAATTTGGAGGGCTTTCCATCAGGGAGCCAGTCACGATTGTCA
GGAACCTTAAAGAGCCAAGCTAGAAGGACACGCGGCACCAAAGCTCTAGGGAGTAAAGCTACTGAGCCAC
CCAGCCCCGATGCAGGAGAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGACAT
GCTGAAACAGCTAGAAAAAGAGTGGATGACACAACAAACTGAACACAACAAAGAAAAAACAGAGTCTGGG
ACTCATCCAAAAGGGACGAGAAGAAAGAAGAAGGAACCTGATTCGGACTAG

Translation (786 aa):
MSFSRALLWARLPAGRQAGHRAAICSALRPHFGPFPGVLGQVSVLATASSSASGGSKIPNTSLFVPLTVK
PQGPSADGDVGAELTRPLDKNEVKKVLDKFYKRKEIQKLGADYGLDARLFHQAFISFRNYIMQSHSLDVD
IHIVLNDICFGAAHADDLFPFFLRHAKQIFPVLDCKDDLRKISDLRIPPNWYPDARAMQRKIIFHSGPTN
SGKTYHAIQKYFSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTGEERVTVQPNGKQASHVSCTVEMCS
VTTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEPAAIDLVMELMYTTGEEVEVRDYKRLTP
ISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLESAVIYGSLPPGTKLAQAKKFNDPNDPCKI
LVATDAIGMGLNLSIRRIIFYSLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHED
LSLLKEILKRPVDPIRAAGLHPTAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAEL
IQHIPLSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEA
VHDVLDLYLWLSYRFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQSRLS
GTLKSQARRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTEHNKEKTESG
THPKGTRRKKKEPDSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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