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Report for CCDS72958.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72958.1 Public Homo sapiens 1 ARHGAP30 24 110 108 CCDS HistoryNCBI Gene:257106Re-query CCDS DB by CCDS ID:72958.1Re-query CCDS DB by GeneID:257106See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72958.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368015.1 ENSP00000356994.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368015.1Link to Ensembl Protein Viewer:ENSP00000356994.1Re-query CCDS DB by Nucleotide ID:ENST00000368015Re-query CCDS DB by Protein ID:ENSP00000356994
Original member Current member NCBI NM_001287602.2 NP_001274531.1 Accepted alive Link to Nucleotide Sequence:NM_001287602.2Link to Protein Sequence:NP_001274531.1Re-query CCDS DB by Nucleotide ID:NM_001287602Re-query CCDS DB by Protein ID:NP_001274531Link to BLAST:NP_001274531.1

Chromosomal Locations for CCDS 72958.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 161047715 161049334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161049424 161049689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161051314 161051715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161052286 161052363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161052440 161052543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161052626 161052797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161053258 161053385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161069620 161069624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2775 nt):
ATGAAGTCTAAGGACATAGAGGCCTCAGGCTTCAATGGGACAGCGGCCTTCATGGAGGTGCGGGTACAAT
CCATCGTCGTGGAGTTCATCCTCACACACGTGGACCAGCTCTTTGGGGGTGCTGCCCTCTCTGGTGGTGA
GGTGGAGAGTGGGTGGCGATCGCTTCCAGGGACCCGGGCATCAGGCAGCCCCGAGGACCTTATGCCCAGG
CCACTGCCTTATCACCTGCCTAGCATACTGCAGGCTGGCGATGGACCCCCACAGATGCGGCCCTACCATA
CTATCATCGAGATTGCAGAGCACAAGAGGAAGGGGTCTTTGAAGGTCAGGAAGTGGAGGTCTATCTTCAA
TTTAGGTCGCTCTGGCCATGAGACTAAGCGTAAACTTCCACGGGGGGCTGAGGACAGGGAGGATAAATCC
AACAAGGGGACACTGCGGCCAGCCAAAAGCATGGACTCACTGAGTGCTGCAGCTGGGGCCAGTGATGAGC
CAGAGGGGCTGGTGGGGCCCAGCAGCCCCCGGCCAAGCCCATTGCTGCCTGAGAGCTTGGAGAACGATTC
TATAGAGGCAGCAGAGGGTGAACAGGAGCCTGAGGCAGAAGCACTGGGTGGCACAAACTCTGAACCAGGC
ACACCACGAGCTGGGCGGTCAGCCATCCGGGCTGGGGGCAGCAGCCGTGCAGAACGCTGTGCTGGTGTCC
ACATCTCAGACCCCTACAATGTCAACCTCCCGCTACACATCACCTCTATCCTCAGTGTGCCCCCGAACAT
CATCTCTAACGTTTCCTTGGCCAGGCTCACCCGTGGCCTTGAGTGCCCTGCTCTACAGCACCGGCCAAGC
CCTGCCTCTGGCCCTGGCCCTGGCCCTGGCCTTGGCCCTGGCCCCCCAGATGAAAAGTTGGAAGCAAGTC
CAGCCTCAAGTCCCCTGGCAGACTCAGGCCCAGACGACTTGGCTCCTGCCCTGGAGGACTCGCTGTCCCA
GGAGGTGCAGGACTCCTTCTCCTTCCTAGAGGACTCAAGCAGCTCAGAACCTGAGTGGGTGGGGGCAGAG
GATGGGGAGGTGGCCCAGGCAGAAGCAGCAGGAGCAGCCTTCTCCCCTGGGGAGGACGACCCTGGGATGG
GCTACCTGGAGGAGCTCCTGGGAGTTGGGCCTCAGGTGGAGGAGTTCTCTGTGGAGCCACCCCTGGATGA
CCTGTCTCTGGATGAGGCACAGTTTGTCTTGGCCCCCAGCTGCTGTTCCCTGGACTCCGCTGGCCCCAGG
CCTGAAGTTGAGGAGGAAAATGGGGAGGAAGTTTTCCTGAGTGCCTATGATGACCTAAGTCCCCTTCTGG
GACCTAAACCCCCAATCTGGAAGGGTTCAGGGAGTCTGGAGGGAGAGGCAGCAGGATGTGGAAGGCAGGC
TCTGGGACAGGGTGGGGAAGAGCAGGCATGCTGGGAAGTTGGGGAGGACAAGCAGGCTGAGCCTGGAGGC
AGGCTAGACATCAGGGAAGAGGCAGAGGGAAGTCCAGAGACCAAGGTGGAGGCTGGAAAGGCCAGTGAGG
ATAGAGGGGAGGCTGGGGGAAGCCAAGAGACAAAAGTCAGATTGAGAGAAGGGAGTAGGGAAGAGACAGA
GGCCAAGGAAGAGAAGTCCAAAGGTCAGAAGAAGGCTGACAGTATGGAGGCTAAAGGTGTGGAGGAACCA
GGAGGAGATGAGTATACAGATGAGAAGGAAAAAGAAATTGAGAGAGAAGAGGATGAACAAAGAGAGGAAG
CCCAGGTAGAAGCTGGAAGGGACCTAGAGCAAGGGGCCCAGGAAGATCAAGTTGCTGAGGAGAAATGGGA
AGTTGTACAGAAACAAGAGGCTGAGGGAGTCAGAGAGGATGAGGACAAAGGACAGAGGGAGAAGGGGTAC
CATGAAGCAAGAAAAGACCAAGGAGATGGTGAAGACAGCAGAAGCCCAGAAGCAGCAACTGAAGGAGGAG
CAGGGGAGGTCAGCAAGGAACGGGAGAGTGGGGATGGAGAGGCTGAGGGAGACCAGAGGGCTGGAGGGTA
CTATTTAGAAGAGGACACCCTCTCTGAAGGTTCAGGTGTAGCGTCCCTGGAGGTTGACTGTGCCAAAGAG
GGCAATCCTCACTCTTCTGAGATGGAAGAGGTAGCCCCACAGCCACCTCAGCCAGAGGAGATGGAGCCTG
AGGGGCAGCCCAGTCCAGACGGCTGTCTATGCCCCTGTTCTCTTGGCCTGGGTGGCGTGGGCATGCGTCT
AGCTTCCACTCTGGTTCAGGTCCAACAGGTCCGCTCTGTGCCTGTGGTGCCCCCCAAGCCACAGTTTGCC
AAGATGCCCAGTGCAATGTGTAGCAAGATTCATGTGGCACCTGCAAATCCATGCCCGAGGCCTGGCCGGC
TTGATGGGACTCCTGGAGAAAGGGCTTGGGGGTCCCGAGCTTCTCGATCCTCTTGGAGGAATGGGGGTAG
TCTTTCCTTTGATGCTGCTGTGGCCCTAGCCCGGGACCGCCAAAGGACTGAGGCTCAAGGAGTTCGGCGA
ACCCAGACCTGTACTGAGGGTGGGGATTACTGCCTCATCCCCAGAACCTCCCCTTGTAGCATGATCTCTG
CCCATTCTCCTCGGCCCCTTAGCTGCCTGGAGCTCCCATCTGAAGGTGCAGAAGGGTCTGGATCCCGGAG
TCGTCTTAGTCTGCCCCCCAGAGAACCCCAGGTTCCTGACCCCCTGTTGTCCTCTCAGCGCAGGTCATAT
GCATTTGAAACACAGGCTAACCCTGGGAAAGGTGAAGGACTGTGA

Translation (924 aa):
MKSKDIEASGFNGTAAFMEVRVQSIVVEFILTHVDQLFGGAALSGGEVESGWRSLPGTRASGSPEDLMPR
PLPYHLPSILQAGDGPPQMRPYHTIIEIAEHKRKGSLKVRKWRSIFNLGRSGHETKRKLPRGAEDREDKS
NKGTLRPAKSMDSLSAAAGASDEPEGLVGPSSPRPSPLLPESLENDSIEAAEGEQEPEAEALGGTNSEPG
TPRAGRSAIRAGGSSRAERCAGVHISDPYNVNLPLHITSILSVPPNIISNVSLARLTRGLECPALQHRPS
PASGPGPGPGLGPGPPDEKLEASPASSPLADSGPDDLAPALEDSLSQEVQDSFSFLEDSSSSEPEWVGAE
DGEVAQAEAAGAAFSPGEDDPGMGYLEELLGVGPQVEEFSVEPPLDDLSLDEAQFVLAPSCCSLDSAGPR
PEVEEENGEEVFLSAYDDLSPLLGPKPPIWKGSGSLEGEAAGCGRQALGQGGEEQACWEVGEDKQAEPGG
RLDIREEAEGSPETKVEAGKASEDRGEAGGSQETKVRLREGSREETEAKEEKSKGQKKADSMEAKGVEEP
GGDEYTDEKEKEIEREEDEQREEAQVEAGRDLEQGAQEDQVAEEKWEVVQKQEAEGVREDEDKGQREKGY
HEARKDQGDGEDSRSPEAATEGGAGEVSKERESGDGEAEGDQRAGGYYLEEDTLSEGSGVASLEVDCAKE
GNPHSSEMEEVAPQPPQPEEMEPEGQPSPDGCLCPCSLGLGGVGMRLASTLVQVQQVRSVPVVPPKPQFA
KMPSAMCSKIHVAPANPCPRPGRLDGTPGERAWGSRASRSSWRNGGSLSFDAAVALARDRQRTEAQGVRR
TQTCTEGGDYCLIPRTSPCSMISAHSPRPLSCLELPSEGAEGSGSRSRLSLPPREPQVPDPLLSSQRRSY
AFETQANPGKGEGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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