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Report for CCDS73032.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73032.1 Public Homo sapiens 1 LYPLAL1 24 110 108 CCDS HistoryNCBI Gene:127018Re-query CCDS DB by CCDS ID:73032.1Re-query CCDS DB by GeneID:127018See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73032.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366927.3 ENSP00000355894.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000366927.3Link to Ensembl Protein Viewer:ENSP00000355894.3Re-query CCDS DB by Nucleotide ID:ENST00000366927Re-query CCDS DB by Protein ID:ENSP00000355894
Original member Current member NCBI NM_001300770.2 NP_001287699.1 Accepted alive Link to Nucleotide Sequence:NM_001300770.2Link to Protein Sequence:NP_001287699.1Re-query CCDS DB by Nucleotide ID:NM_001300770Re-query CCDS DB by Protein ID:NP_001287699Link to BLAST:NP_001287699.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287699.1 221 Q5VWZ2-2 221 100% 0 0

Chromosomal Locations for CCDS 73032.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 219173891 219173981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 219179147 219179246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 219193130 219193251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 219210532 219210647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 219211492 219211728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (666 nt):
ATGGCGGCTGCGTCGGGGTCGGTTCTGCAGCGCTGTATCGTGTCGCCGGCAGGGAGGCATAGCGCCTCTC
TGATCTTCCTGCATGGCTCAGGTGATTCTGGACAAGGATTAAGAATGTGGATCAAGCAGGTTTTAAATCA
AGATTTAACATTCCAACACATAAAAATTATTTATCCAACAGCTCCTCCCAGATTTAAAATAACCAATGAC
TGCCCAGAACACCTTGAATCAATTGATGTCATGTGTCAAGTGCTTACTGATTTGATTGATGAAGAAGTAA
AAAGTGGCATCAAGAAGAACAGGATATTAATAGGAGGATTCTCTATGGGAGGATGCATGGCAATACATTT
AGCATATAGAAATCATCAAGATGTGGCAGGAGTATTTGCTCTTTCTAGTTTTCTGAATAAAGCATCTGCT
GTTTACCAGGCTCTTCAGAAGAGTAATGGTGTACTTCCTGAATTATTTCAGTGTCATGGTACTGCAGATG
AGTTAGTTCTTCATTCTTGGGCAGAAGAGACAAACTCAATGTTAAAATCTCTAGGAGTGACCACGAAGTT
TCATAGTTTTCCAAATGTTTACCATGAGCTAAGCAAAACTGAGTTAGACATATTGAAGTTATGGATTCTT
ACAAAGCTGCCAGGAGAAATGGAAAAACAAAAATGA

Translation (221 aa):
MAAASGSVLQRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRFKITND
CPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAIHLAYRNHQDVAGVFALSSFLNKASA
VYQALQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWIL
TKLPGEMEKQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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