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Report for CCDS73070.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73070.1 Public Homo sapiens 10 PTER 24 110 108 CCDS HistoryNCBI Gene:9317Re-query CCDS DB by CCDS ID:73070.1Re-query CCDS DB by GeneID:9317See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73070.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423462.6 ENSP00000389535.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423462.6Link to Ensembl Protein Viewer:ENSP00000389535.3Re-query CCDS DB by Nucleotide ID:ENST00000423462Re-query CCDS DB by Protein ID:ENSP00000389535
Original member Current member NCBI NM_001261838.2 NP_001248767.1 Accepted alive Link to Nucleotide Sequence:NM_001261838.2Link to Protein Sequence:NP_001248767.1Re-query CCDS DB by Nucleotide ID:NM_001261838Re-query CCDS DB by Protein ID:NP_001248767Link to BLAST:NP_001248767.1

Chromosomal Locations for CCDS 73070.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 16486367 16486617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 16505020 16505160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 16511046 16511256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (603 nt):
ATGAATGAAATTCTCCATGGAGCTGATGGAACCAGTATCAAGTGTGGCATTATTGGAGAAATTGGTTGCT
CCTGGCCTTTGACTGAGAGTGAAAGAAAGGTTCTCCAGGCCACAGCTCATGCCCAGGCTCAGCTTGGTTG
TCCTGTTATTATCCATCCTGGACGGAGCTCCAGGGCACCATTTCAGATTATCCGAATATTGCAAGAAGCA
GGCGCAGACATCTCCAAAACAGTCATGTCACACCTGGATAGGACTATTCTTGATAAGAAAGAGCTCTTGG
AGTTTGCTCAACTTGGCTGCTACTTGGAATATGATCTCTTTGGTACTGAACTACTTCATTACCAACTCGG
CCCAGATATTGACATGCCTGATGATAACAAAAGAATTAGAAGGGTGCGTCTCCTGGTGGAAGAGGGCTGT
GAAGATCGAATTCTGGTAGCACATGACATACATACGAAAACCCGGCTGATGAAATATGGAGGTCACGGCT
ATTCTCATATACTCACCAATGTTGTTCCTAAAATGTTGCTGAGAGGCATAACTGAGAATGTGCTTGATAA
GATTCTAATAGAGAACCCTAAGCAATGGCTAACTTTCAAATAG

Translation (200 aa):
MNEILHGADGTSIKCGIIGEIGCSWPLTESERKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRILQEA
GADISKTVMSHLDRTILDKKELLEFAQLGCYLEYDLFGTELLHYQLGPDIDMPDDNKRIRRVRLLVEEGC
EDRILVAHDIHTKTRLMKYGGHGYSHILTNVVPKMLLRGITENVLDKILIENPKQWLTFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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