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Report for CCDS73231.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73231.2 Public Homo sapiens 11 TMEM80 24 110 108 CCDS HistoryNCBI Gene:283232Re-query CCDS DB by CCDS ID:73231.2Re-query CCDS DB by GeneID:283232See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 73231.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000608174.6 ENSP00000476563.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000608174.6Link to Ensembl Protein Viewer:ENSP00000476563.3Re-query CCDS DB by Nucleotide ID:ENST00000608174Re-query CCDS DB by Protein ID:ENSP00000476563
Original member Current member NCBI NM_001276253.2 NP_001263182.2 Accepted alive Link to Nucleotide Sequence:NM_001276253.2Link to Protein Sequence:NP_001263182.2Re-query CCDS DB by Nucleotide ID:NM_001276253Re-query CCDS DB by Protein ID:NP_001263182Link to BLAST:NP_001263182.2

Chromosomal Locations for CCDS 73231.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 695828 695846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 698869 698888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 700142 700212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 703675 703735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (171 nt):
ATGGCGGCCCCGCGGCGAGGGAGAGGATCCTCCACAGTGCTCTCTTCAGTTCCCCTTCAAATGCTGTTTT
ATCTCAGCGGAACGTACTACGCCCTGTATTTCCTCGCCACCTCTGCCTCACAGGCAGGCAGGCCCGGTGC
AAGAGTGGACTCTGGGTTCCTAAAGCAATAA

Translation (56 aa):
MAAPRRGRGSSTVLSSVPLQMLFYLSGTYYALYFLATSASQAGRPGARVDSGFLKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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