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Report for CCDS73250.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73250.1 Public Homo sapiens 11 ARFIP2 24 110 108 CCDS HistoryNCBI Gene:23647Re-query CCDS DB by CCDS ID:73250.1Re-query CCDS DB by GeneID:23647See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73250.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614314.4 ENSP00000484121.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614314.4Link to Ensembl Protein Viewer:ENSP00000484121.1Re-query CCDS DB by Nucleotide ID:ENST00000614314Re-query CCDS DB by Protein ID:ENSP00000484121
Original member Current member NCBI NM_001242854.3 NP_001229783.1 Accepted alive Link to Nucleotide Sequence:NM_001242854.3Link to Protein Sequence:NP_001229783.1Re-query CCDS DB by Nucleotide ID:NM_001242854Re-query CCDS DB by Protein ID:NP_001229783Link to BLAST:NP_001229783.1

Chromosomal Locations for CCDS 73250.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 6477113 6477268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6477718 6477892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6478041 6478198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6478738 6478959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6479140 6479357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6479972 6480068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6480323 6480421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1125 nt):
ATGACGGACGGGATCCTAGGGAAGGCAGCCACAATGGAGATCCCTATCCACGGGAACGGCGAAGCCAGGC
AGCTTCCTGAAGATGATGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAATGA
AACCAGCATTGTGTCTGGTGGCTATGGGGGCTCTGGTGATGGACTCATCCCCACAGGGAAGTCAATTTCA
TGTGCTCGAAGAGAAGTATGGGTGGGGCCACAGAGGTGTCTGGTGTATCTGAGAGAGGCTGGTGTCAGAG
AACTTGATCCTTTAGGGTCTGGCCGCCATCCATCTCACAGCACCACTCCTTCTGGCCCTGGAGATGAGGT
GGCTCGGGGCATTGCTGGAGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAACACCTATAAGTGCACA
AAGCAACTGTTATCAGAACGATTTGGTCGAGGCTCACGGACTGTGGACCTGGAGCTAGAGCTGCAGATTG
AGTTGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCT
CTACAGCCTGCTGCAGACCCAGCATGCACTGGGTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAG
CTTCAGGAGGAATTTGGCTACAATGCAGAGACACAGAAACTACTATGCAAGAATGGGGAAACGCTGCTAG
GAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATTGGTCACCAAGACCATGGAAGACACGCTCATGAC
TGTGAAACAGTATGAGGCTGCCAGGCTGGAATATGATGCCTACCGAACAGACTTAGAGGAGCTGAGTCTA
GGCCCCCGGGATGCAGGGACACGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACA
AGTATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAACAAGATCAAGGTGAT
GCACAAGCAGCTGCTGCTCTTCCACAATGCTGTGTCCGCCTACTTTGCTGGGAACCAGAAACAGCTGGAG
CAGACCCTGCAGCAGTTCAACATCAAGCTGCGGCCTCCAGGAGCTGAGAAACCCTCCTGGCTAGAGGAGC
AGTGA

Translation (374 aa):
MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGDGLIPTGKSIS
CARREVWVGPQRCLVYLREAGVRELDPLGSGRHPSHSTTPSGPGDEVARGIAGEKFDIVKKWGINTYKCT
KQLLSERFGRGSRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPE
LQEEFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSL
GPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLE
QTLQQFNIKLRPPGAEKPSWLEEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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