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Report for CCDS73334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73334.1 Public Homo sapiens 11 UNC93B1 24 110 108 CCDS HistoryNCBI Gene:81622Re-query CCDS DB by CCDS ID:73334.1Re-query CCDS DB by GeneID:81622See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73334.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000227471.7 ENSP00000227471.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000227471.7Link to Ensembl Protein Viewer:ENSP00000227471.3Re-query CCDS DB by Nucleotide ID:ENST00000227471Re-query CCDS DB by Protein ID:ENSP00000227471
Original member Current member NCBI NM_030930.4 NP_112192.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030930.4Link to Protein Sequence:NP_112192.2Re-query CCDS DB by Nucleotide ID:NM_030930Re-query CCDS DB by Protein ID:NP_112192Link to BLAST:NP_112192.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112192.2 597 Q9H1C4 597 100% 0 0

Chromosomal Locations for CCDS 73334.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 67991546 67991857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67993676 67993794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67995611 67995884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67996602 67996784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67997675 67997799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67998359 67998452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67999173 67999305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67999519 67999680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68003022 68003175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68003657 68003798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68003948 68004043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1794 nt):
ATGGAGGCGGAGCCGCCGCTCTACCCGATGGCGGGGGCTGCGGGGCCGCAGGGCGACGAGGACCTGCTCG
GGGTCCCGGACGGGCCCGAGGCCCCGCTGGACGAGCTGGTGGGCGCGTACCCCAACTACAACGAGGAGGA
GGAGGAGCGCCGCTACTACCGCCGCAAGCGCCTGGGCGTGCTCAAGAACGTGCTGGCTGCCAGCGCCGGG
GGCATGCTCACCTACGGCGTCTACCTGGGCCTCCTGCAGATGCAGCTGATCCTGCACTACGACGAGACCT
ACCGCGAGGTGAAGTATGGCAACATGGGGCTGCCCGACATCGACAGCAAAATGCTGATGGGCATCAACGT
GACTCCCATCGCCGCCCTGCTCTACACACCTGTGCTCATCAGGTTTTTTGGAACGAAGTGGATGATGTTC
CTCGCTGTGGGCATCTACGCCCTCTTTGTCTCCACCAACTACTGGGAGCGCTACTACACGCTTGTGCCCT
CGGCTGTGGCCCTGGGCATGGCCATCGTGCCTCTTTGGGCTTCCATGGGCAACTACATCACCAGGATGGC
GCAGAAGTACCATGAGTACTCCCACTACAAGGAGCAGGATGGGCAGGGGATGAAGCAGCGGCCTCCGCGG
GGCTCCCACGCGCCCTATCTCCTGGTCTTCCAAGCCATCTTCTACAGCTTCTTCCATCTGAGCTTCGCCT
GCGCCCAGCTGCCCATGATTTATTTCCTGAACCACTACCTGTATGACCTGAACCACACGCTGTACAATGT
GCAGAGCTGCGGCACCAACAGCCACGGGATCCTCAGCGGCTTCAACAAGACGGTTCTGCGGACGCTCCCG
CGGAGCGGAAACCTCATTGTGGTGGAGAGCGTGCTCATGGCAGTGGCCTTCCTGGCCATGCTGCTGGTGC
TGGGTTTGTGCGGAGCCGCTTACCGGCCCACGGAGGAGATCGATCTGCGCAGCGTGGGCTGGGGCAACAT
CTTCCAGCTGCCCTTCAAGCACGTGCGTGACTACCGCCTGCGCCACCTCGTGCCTTTCTTTATCTACAGC
GGCTTCGAGGTGCTCTTTGCCTGCACTGGTATCGCCTTGGGCTATGGCGTGTGCTCGGTGGGGCTGGAGC
GGCTGGCTTACCTCCTCGTGGCTTACAGCCTGGGCGCCTCAGCCGCCTCACTCCTGGGCCTGCTGGGCCT
GTGGCTGCCACGCCCGGTGCCCCTGGTGGCCGGAGCAGGGGTGCACCTGCTGCTCACCTTCATCCTCTTT
TTCTGGGCCCCTGTGCCTCGGGTCCTGCAACACAGCTGGATCCTCTATGTGGCAGCTGCCCTTTGGGGTG
TGGGCAGTGCCCTGAACAAGACTGGACTCAGCACACTCCTGGGAATCTTGTACGAAGACAAGGAGAGACA
GGACTTCATCTTCACCATCTACCACTGGTGGCAGGCTGTGGCCATCTTCACCGTGTACCTGGGCTCGAGC
CTGCACATGAAGGCTAAGCTGGCGGTGCTGCTGGTGACGCTGGTGGCGGCCGCGGTCTCCTACCTGCGGA
TGGAGCAGAAGCTGCGCCGGGGCGTGGCCCCGCGCCAGCCCCGCATCCCGCGGCCCCAGCACAAGGTGCG
CGGTTACCGCTACTTGGAGGAGGACAACTCGGACGAGAGCGACGCGGAGGGCGAGCATGGGGACGGCGCG
GAGGAGGAGGCGCCGCCCGCAGGGCCCAGGCCTGGCCCCGAGCCCGCTGGACTCGGCCGCCGGCCCTGCC
CGTACGAACAGGCGCAGGGGGGAGACGGGCCGGAGGAGCAGTGA

Translation (597 aa):
MEAEPPLYPMAGAAGPQGDEDLLGVPDGPEAPLDELVGAYPNYNEEEEERRYYRRKRLGVLKNVLAASAG
GMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPIAALLYTPVLIRFFGTKWMMF
LAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYITRMAQKYHEYSHYKEQDGQGMKQRPPR
GSHAPYLLVFQAIFYSFFHLSFACAQLPMIYFLNHYLYDLNHTLYNVQSCGTNSHGILSGFNKTVLRTLP
RSGNLIVVESVLMAVAFLAMLLVLGLCGAAYRPTEEIDLRSVGWGNIFQLPFKHVRDYRLRHLVPFFIYS
GFEVLFACTGIALGYGVCSVGLERLAYLLVAYSLGASAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILF
FWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIFTVYLGSS
LHMKAKLAVLLVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGA
EEEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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