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Report for CCDS73346.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73346.1 Public Homo sapiens 11 FAM168A 24 110 108 CCDS HistoryNCBI Gene:23201Re-query CCDS DB by CCDS ID:73346.1Re-query CCDS DB by GeneID:23201See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73346.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000064778.8 ENSP00000064778.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000064778.8Link to Ensembl Protein Viewer:ENSP00000064778.4Re-query CCDS DB by Nucleotide ID:ENST00000064778Re-query CCDS DB by Protein ID:ENSP00000064778
Original member Current member NCBI NM_001286050.2 NP_001272979.1 Accepted alive Link to Nucleotide Sequence:NM_001286050.2Link to Protein Sequence:NP_001272979.1Re-query CCDS DB by Nucleotide ID:NM_001286050Re-query CCDS DB by Protein ID:NP_001272979Link to BLAST:NP_001272979.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001272979.1 244 Q92567-1 244 100% 0 0

Chromosomal Locations for CCDS 73346.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 73407531 73407643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73409487 73409661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73411394 73411536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73419874 73419999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73425022 73425048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73430690 73430770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73468405 73468474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (735 nt):
ATGAACCCTGTTTACAGCCCCGTGCAGCCTGGGGCTCCTTATGGCAACCCTAAGAACATGGCCTACACGG
GTTACCCCACAGCCTATCCAGCAGCTGCCCCTGCCTACAATCCCAGCCTGTACCCCACCAATAGTCCCAG
TTATGCTCCAGAGTTTCAGTTCCTGCATTCAGCTTATGCAACTCTGCTGATGAAACAGGCCTGGCCACAG
AACTCGTCTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCAGTGGACACCGGGACCGAGAACCGAACTT
ACCAAGCATCCTCTGCGGCTTTCAGATATACTGCGGGGACACCATACAAGGTCCCACCGACCCAGAGTAA
CACTGCTCCACCCCCCTACTCCCCATCACCCAACCCCTATCAGACGGCCATGTATCCAATCAGAAGTGCC
TACCCCCAGCAGAATCTGTATGCCCAGGGAGCCTACTACACACAGCCGGTGTATGCTGCCCAGCCTCATG
TCATCCACCATACCACGGTCGTCCAGCCCAACAGCATTCCCTCTGCTATCTACCCAGCACCTGTTGCCGC
CCCGAGGACCAACGGTGTGGCCATGGGCATGGTGGCAGGCACCACCATGGCAATGTCAGCAGGTACCCTG
CTGACTACACCCCAGCACACGGCGATTGGGGCACACCCTGTCTCCATGCCAACATATAGGGCCCAAGGAA
CCCCTGCGTACAGCTACGTGCCCCCACACTGGTAA

Translation (244 aa):
MNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPEFQFLHSAYATLLMKQAWPQ
NSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPIRSA
YPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGTL
LTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPHW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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