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Report for CCDS73482.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73482.1 Public Homo sapiens 12 GLS2 24 110 108 CCDS HistoryNCBI Gene:27165Re-query CCDS DB by CCDS ID:73482.1Re-query CCDS DB by GeneID:27165See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73482.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000610413.4 ENSP00000483010.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610413.4Link to Ensembl Protein Viewer:ENSP00000483010.1Re-query CCDS DB by Nucleotide ID:ENST00000610413Re-query CCDS DB by Protein ID:ENSP00000483010
Original member Current member EBI ENST00000623608.3 ENSP00000485315.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000623608.3Link to Ensembl Protein Viewer:ENSP00000485315.1Re-query CCDS DB by Nucleotide ID:ENST00000623608Re-query CCDS DB by Protein ID:ENSP00000485315
Original member Current member NCBI NM_001280797.2 NP_001267726.1 Accepted alive Link to Nucleotide Sequence:NM_001280797.2Link to Protein Sequence:NP_001267726.1Re-query CCDS DB by Nucleotide ID:NM_001280797Re-query CCDS DB by Protein ID:NP_001267726Link to BLAST:NP_001267726.1
Original member Current member NCBI NM_001280798.2 NP_001267727.1 Accepted alive Link to Nucleotide Sequence:NM_001280798.2Link to Protein Sequence:NP_001267727.1Re-query CCDS DB by Nucleotide ID:NM_001280798Re-query CCDS DB by Protein ID:NP_001267727Link to BLAST:NP_001267727.1

Chromosomal Locations for CCDS 73482.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56471487 56471643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56471773 56471836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56472119 56472195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56472690 56472751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56473228 56473320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56473463 56473594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56474544 56474720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56474846 56474896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56475044 56475110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56475624 56475682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56475945 56475977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56477660 56477701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1014 nt):
ATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTG
ATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAATGCCACATTCCA
GTCAGAGAAGGAAACAGGGGATCGGAATTATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGCTTTCCT
AAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTCCAGCTGTGTTCTGTGGAGGTCACTTGTGAAT
CAGGCAGTGTCATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGCTGAG
TGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCATTCCTGCGGCATGTATGACTTCTCTGGCCAGTTT
GCCTTCCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCA
TGGGAATGATGTGCCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCA
GAAGTTGGTGTCTCTCTTCAATTTCCACAACTATGACAACCTGAGGCACTGTGCTCGGAAGTTAGACCCA
CGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGTGGTCAACCTGTTATTTGCTGCCTATAGTGGCGATG
TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACTATGACTCGCGCACAGC
TCTGCATGTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTGCAAAGTGAAT
CCTTTTGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGG
TCAAACTGCTTCAAGATTACCAGGACTCCTACACACTCTCTGAAACTCAGGCTGAGGCAGCAGCTGAGGC
CCTGTCCAAAGAGAACTTAGAAAGCATGGTATGA

Translation (337 aa):
MVNAGAIVVSSLIKMDCNKAEKFDFVLQYLNKMAGNEYMGFSNATFQSEKETGDRNYAIGYYLKEKKCFP
KGVDMMAALDLYFQLCSVEVTCESGSVMAATLANGGICPITGESVLSAEAVRNTLSLMHSCGMYDFSGQF
AFHVGLPAKSAVSGAILLVVPNVMGMMCLSPPLDKLGNSHRGTSFCQKLVSLFNFHNYDNLRHCARKLDP
RREGAEIRNKTVVNLLFAAYSGDVSALRRFALSAMDMEQKDYDSRTALHVAAAEGHIEVVKFLIEACKVN
PFAKDRWGNIPLDDAVQFNHLEVVKLLQDYQDSYTLSETQAEAAAEALSKENLESMV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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