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Report for CCDS73512.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73512.1 Public Homo sapiens 12 WASHC3 24 110 108 CCDS HistoryNCBI Gene:51019Re-query CCDS DB by CCDS ID:73512.1Re-query CCDS DB by GeneID:51019See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73512.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000545679.5 ENSP00000443857.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545679.5Link to Ensembl Protein Viewer:ENSP00000443857.1Re-query CCDS DB by Nucleotide ID:ENST00000545679Re-query CCDS DB by Protein ID:ENSP00000443857
Original member Current member NCBI NM_001301107.1 NP_001288036.1 Accepted alive Link to Nucleotide Sequence:NM_001301107.1Link to Protein Sequence:NP_001288036.1Re-query CCDS DB by Nucleotide ID:NM_001301107Re-query CCDS DB by Protein ID:NP_001288036Link to BLAST:NP_001288036.1

Chromosomal Locations for CCDS 73512.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 102013108 102013192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102025974 102026038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102039868 102039975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102044105 102044212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102046054 102046119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102061248 102061346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102061912 102061962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGATGAGGACGGGCTTCCTCTCATGGGGTCAGGCATAGACCTGACCAAGGTGCCAGCTATTCAACAGA
AAAGAACGGTGGCTTTTCTAAACCAATTTGTGGTGCACACTGTACAGTTCCTCAACCGCTTTTCTACAGT
TTGTGAGGAGAAACTGGCAGACCTTTCACTTCGTATCCAACAAATTGAAACAACTCTCAATATTTTAGAT
GCAAAGTTGTCATCTATCCCAGGCCTAGATGATGTCACAGTTGAAGTATCTCCTTTAAATGTCACCAGTG
TCACAAATGGAGCACATCCTGAAGCCACTTCAGAGCAACCACAGAACAGTACACAAGACTCTGGACTACA
GGAAAGTGAAGTATCAGCAGAAAATATCTTAACTGTAGCCAAGGATCCAAGATATGCCAGATATCTCAAA
ATGGTTCAAGTGGGTGTACCAGTGATGGCAATAAGAAACAAAATGATATCAGAAGGACTAGACCCAGATC
TTCTTGAGAGGCCAGATGCTCCAGTGCCTGATGGCGAAAGTGAGAAAACTGTAGAAGAAAGTTCAGATAG
CGAATCTTCTTTTAGTGATTAA

Translation (193 aa):
MDEDGLPLMGSGIDLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILD
AKLSSIPGLDDVTVEVSPLNVTSVTNGAHPEATSEQPQNSTQDSGLQESEVSAENILTVAKDPRYARYLK
MVQVGVPVMAIRNKMISEGLDPDLLERPDAPVPDGESEKTVEESSDSESSFSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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