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Report for CCDS73546.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73546.1 Public Homo sapiens 12 RAN 24 110 108 CCDS HistoryNCBI Gene:5901Re-query CCDS DB by CCDS ID:73546.1Re-query CCDS DB by GeneID:5901See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73546.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000541630.5 ENSP00000441210.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541630.5Link to Ensembl Protein Viewer:ENSP00000441210.1Re-query CCDS DB by Nucleotide ID:ENST00000541630Re-query CCDS DB by Protein ID:ENSP00000441210
Original member Current member NCBI NM_001300796.2 NP_001287725.1 Accepted alive Link to Nucleotide Sequence:NM_001300796.2Link to Protein Sequence:NP_001287725.1Re-query CCDS DB by Nucleotide ID:NM_001300796Re-query CCDS DB by Protein ID:NP_001287725Link to BLAST:NP_001287725.1
Original member Current member NCBI NM_001300797.2 NP_001287726.1 Accepted alive Link to Nucleotide Sequence:NM_001300797.2Link to Protein Sequence:NP_001287726.1Re-query CCDS DB by Nucleotide ID:NM_001300797Re-query CCDS DB by Protein ID:NP_001287726Link to BLAST:NP_001287726.1

Chromosomal Locations for CCDS 73546.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 130874563 130874733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130875612 130875782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130875882 130875926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGTTTGATGTAACATCGAGAGTTACTTACAAGAATGTGCCTAACTGGCATAGAGATCTGGTACGAGTGT
GTGAAAACATCCCCATTGTGTTGTGTGGCAACAAAGTGGATATTAAGGACAGGAAAGTGAAGGCGAAATC
CATTGTCTTCCACCGAAAGAAGAATCTTCAGTACTACGACATTTCTGCCAAAAGTAACTACAACTTTGAA
AAGCCCTTCCTCTGGCTTGCTAGGAAGCTCATTGGAGACCCTAACTTGGAATTTGTTGCCATGCCTGCTC
TCGCCCCACCAGAAGTTGTCATGGACCCAGCTTTGGCAGCACAGTATGAGCACGACTTAGAGGTTGCTCA
GACAACTGCTCTCCCGGATGAGGATGATGACCTGTGA

Translation (128 aa):
MFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFE
KPFLWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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