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Report for CCDS73623.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73623.1 Public Homo sapiens 14 TM9SF1 24 110 108 CCDS HistoryNCBI Gene:10548Re-query CCDS DB by CCDS ID:73623.1Re-query CCDS DB by GeneID:10548See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73623.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000524835.5 ENSP00000434387.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000524835.5Link to Ensembl Protein Viewer:ENSP00000434387.1Re-query CCDS DB by Nucleotide ID:ENST00000524835Re-query CCDS DB by Protein ID:ENSP00000434387
Original member Current member NCBI NM_001289006.2 NP_001275935.1 Accepted alive Link to Nucleotide Sequence:NM_001289006.2Link to Protein Sequence:NP_001275935.1Re-query CCDS DB by Nucleotide ID:NM_001289006Re-query CCDS DB by Protein ID:NP_001275935Link to BLAST:NP_001275935.1

Chromosomal Locations for CCDS 73623.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24189415 24189808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24190380 24190653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24192171 24192356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24192648 24193269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24194675 24194758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1560 nt):
ATGGCTGAGTCTTTGTATGAGATCCGCTTTCGGGAAAACGTGGAGAAGAGAATTCTGTGCCACATGCAGC
TCAGTTCTGCACAGGTGGAGCAGCTGCGCCAGGCCATTGAAGAACTGTACTACTTTGAATTTGTGGTAGA
TGACTTGCCAATCCGGGGCTTTGTGGGCTACATGGAGGAGAGTGGTTTCCTGCCACACAGCCACAAGATA
GGACTCTGGACCCATTTGGACTTCCACCTAGAATTCCATGGAGACCGAATTATATTTGCCAATGTTTCAG
TGCGGGACGTCAAGCCCCACAGCTTGGATGGGTTACGACCTGACGAGTTCCTAGGCCTTACCCACACTTA
TAGCGTGCGCTGGTCTGAGACTTCAGTGGAGCGTCGGAGTGACAGGCGCCGTGGTGACGATGGTGGTTTC
TTTCCTCGAACACTGGAAATCCATTGGTTGTCCATCATCAACTCCATGGTGCTTGTGTTTTTACTGGTGG
GTTTTGTGGCTGTCATTCTAATGCGTGTGCTTCGGAATGACCTGGCTCGGTACAACTTAGATGAGGAGAC
CACCTCTGCAGGTTCTGGTGATGACTTTGACCAGGGTGACAATGGCTGGAAAATTATCCATACAGATGTC
TTCCGCTTCCCCCCATACCGTGGTCTGCTCTGTGCTGTGCTTGGCGTGGGTGCCCAGTTCCTGGCCCTTG
GCACTGGCATTATTGTCATGGCACTGCTGGGCATGTTCAATGTGCACCGTCATGGGGCCATTAACTCAGC
AGCCATCTTGTTGTATGCCCTGACCTGCTGCATCTCTGGCTACGTGTCCAGCCACTTCTACCGGCAGATT
GGAGGCGAGCGTTGGGTGTGGAACATCATTCTCACCACCAGTCTCTTCTCTGTGCCTTTCTTCCTGACGT
GGAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCCTGCT
GCTTCTGACGGTTTGGCTGCTGGTGGGCTTTCCCCTCACTGTCATTGGAGGCATCTTTGGGAAGAACAAC
GCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACA
AGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCTGTGGAGCTGTACTA
CATCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCTTTGTCTTCGCCATC
CTGCTGAGTGTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGATTACCGCT
GGTGGTGGCGATCTGTGCTGAGTGTTGGCTCCACCGGCCTCTTCATCTTCCTCTACTCAGTTTTCTATTA
TGCCCGGCGCTCCAACATGTCTGGGGCAGTACAGACAGTAGAGTTCTTCGGCTACTCCTTACTCACTGGT
TATGTCTTCTTCCTCATGCTGGGCACCATCTCCTTTTTTTCTTCCCTAAAGTTCATCCGGTATATCTATG
TTAACCTCAAGATGGACTGA

Translation (519 aa):
MAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKI
GLWTHLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRPDEFLGLTHTYSVRWSETSVERRSDRRRGDDGGF
FPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSGDDFDQGDNGWKIIHTDV
FRFPPYRGLLCAVLGVGAQFLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQI
GGERWVWNIILTTSLFSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNN
ASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAI
LLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTG
YVFFLMLGTISFFSSLKFIRYIYVNLKMD


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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