NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS73787.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73787.1 Public Homo sapiens 15 SYNM 24 110 108 CCDS HistoryNCBI Gene:23336Re-query CCDS DB by CCDS ID:73787.1Re-query CCDS DB by GeneID:23336See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73787.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336292.11 ENSP00000336775.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000336292.11Link to Ensembl Protein Viewer:ENSP00000336775.7Re-query CCDS DB by Nucleotide ID:ENST00000336292Re-query CCDS DB by Protein ID:ENSP00000336775
Original member Current member NCBI NM_145728.3 NP_663780.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145728.3Link to Protein Sequence:NP_663780.2Re-query CCDS DB by Nucleotide ID:NM_145728Re-query CCDS DB by Protein ID:NP_663780Link to BLAST:NP_663780.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663780.2 1565 O15061-1 1565 100% 0 0

Chromosomal Locations for CCDS 73787.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 99105200 99106009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99113591 99113715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99126722 99126792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99129367 99133058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4698 nt):
ATGCTGTCCTGGCGGCTGCAGACGGGCCCCGAGAAGGCCGAGCTCCAGGAGCTCAACGCCCGGCTCTATG
ACTACGTGTGTCGGGTGCGGGAGCTGGAGCGCGAAAACCTACTCCTGGAGGAGGAGCTGCGCGGCCGGCG
CGGGCGAGAGGGCCTGTGGGCCGAGGGGCAGGCCCGCTGCGCCGAGGAGGCGCGCAGCTTGCGGCAGCAG
CTGGACGAGCTGAGCTGGGCCACTGCGCTGGCGGAGGGCGAGCGGGACGCTCTGCGGCGCGAGCTGCGGG
AGCTGCAGCGCCTGGATGCGGAGGAGCGCGCCGCCCGCGGCCGCCTGGACGCCGAGCTGGGTGCGCAGCA
GCGCGAGCTGCAGGAGGCGCTGGGCGCGCGCGCCGCCCTCGAGGCGCTGCTGGGCCGGCTGCAGGCCGAG
CGCCGAGGCCTCGACGCGGCCCACGAACGCGACGTGAGGGAGCTGCGCGCGCGCGCCGCCAGCCTTACCA
TGCATTTCCGCGCCCGCGCCACCGGCCCCGCCGCGCCGCCGCCACGCCTGCGGGAGGTGCACGACAGCTA
CGCACTGCTGGTGGCCGAGTCGTGGCGGGAGACGGTGCAGCTGTACGAGGACGAGGTGCGCGAGCTGGAG
GAGGCGCTGCGGCGCGGCCAGGAGAGCAGACTCCAGGCGGAGGAAGAGACGCGGCTGTGCGCGCAGGAGG
CAGAGGCGCTGCGGCGCGAGGCGCTCGGGTTGGAGCAGCTGCGCGCGCGGCTGGAGGACGCGCTGCTGCG
GATGCGCGAGGAGTACGGGATACAGGCCGAGGAGCGGCAGAGAGTGATTGACTGCCTGGAGGATGAGAAG
GCAACCCTCACCTTGGCCATGGCTGACTGGCTGCGGGACTATCAGGACCTCCTGCAGGTGAAGACCGGCC
TCAGTCTGGAGGTGGCGACCTACCGGGCCTTATTGGAAGGAGAAAGTAATCCAGAGATAGTGATCTGGGC
TGAGCACGTTGAAAACATGCCGTCAGAATTCAGAAACAAATCCTATCACTATACCGACTCACTACTACAG
AGGGAAAATGAAAGGAATCTATTTTCAAGGCAGAAAGCACCTTTGGCAAGTTTCAATCACAGCTCGGCAC
TGTATTCTAACCTGTCAGGGCACCGTGGATCTCAGACGGGCACATCTATTGGAGGTGATGCCAGAAGAGG
CTTCTTGGGCTCGGGATATTCTTCCTCGGCCACTACCCAGCAGGAAAACTCATACGGAAAAGCCGTCAGC
AGTCAAACCAACGTCAGAACTTTCTCTCCAACCTATGGCCTTTTAAGAAATACTGAGGCTCAAGTGAAAA
CATTCCCTGACAGACCAAAAGCCGGAGATACAAGGGAGGTCCCCGTTTACATAGGTGAAGATTCCACAAT
TGCCCGCGAGTCGTACCGGGATCGCCGAGACAAGGTGGCAGCAGGTGCTTCGGAAAGCACACGGTCAAAT
GAGAGGACCGTCATTCTGGGAAAGAAAACAGAAGTGAAAGCCACGAGGGAGCAAGAAAGAAACAGACCAG
AAACCATCCGAACAAAGCCAGAAGAGAAAATGTTCGATTCTAAAGAGAAGGCTTCCGAGGAGAGAAACCT
AAGATGGGAAGAATTGACAAAGTTAGATAAGGAAGCGAGACAGAGAGAAAGCCAGCAGATGAAGGAGAAG
GCTAAGGAGAAGGACTCACCGAAGGAGAAGAGCGTGCGAGAGAGAGAGGTGCCGATTAGTCTAGAAGTAT
CCCAGGACAGAAGAGCAGAGGTGTCCCCGAAAGGTTTGCAGACGCCTGTGAAGGATGCTGGTGGTGGGAC
CGGTAGAGAGGCAGAAGCAAGAGAGCTACGGTTCAGGTTGGGCACCAGTGATGCCACTGGTTCTCTGCAA
GGCGATTCCATGACAGAAACCGTAGCAGAAAACATCGTTACCAGTATCCTGAAGCAGTTCACTCAGTCTC
CAGAGACAGAAGCATCTGCTGATTCTTTTCCAGACACAAAAGTCACTTACGTGGACAGGAAAGAGCTTCC
TGGGGAAAGGAAAACAAAGACTGAAATAGTTGTGGAGTCTAAACTGACTGAGGATGTTGATGTTTCCGAT
GAAGCTGGCCTGGACTACCTTTTAAGCAAGGATATTAAGGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGC
AGATGATAGGAGACATCATCAACCTCGGCCTGAAAGGGAGGGAGGGGAGAGCAAAGGTCGTCAACGTGGA
GATCGTGGAGGAGCCCGTGAGTTATGTCAGCGGGGAGAAGCCGGAGGAGTTTTCCGTCCCATTCAAAGTG
GAGGAGGTCGAAGATGTGTCGCCAGGCCCCTGGGGGTTGGTTAAGGAGGAGGAAGGTTATGGAGAAAGCG
ATGTCACATTCTCAGTTAATCAGCATCGAAGGACCAAGCAGCCTCAGGAGAACACGACTCACGTGGAAGA
AGTGACAGAGGCAGGTGATTCAGAGGGCGAGCAGAGTTATTTTGTGTCCACTCCAGATGAACACCCCGGG
GGGCACGACAGAGATGACGGCTCGGTGTACGGGCAGATCCACATCGAGGAGGAATCCACCATCAGGTACT
CTTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAGGACACAGAAGGACGGTGCAGTGGGCGAGAAGGT
TGTGAAGCCCTTGGATGTCCCAGCGCCCTCTCTGGAGGGGGACCTGGGTTCCACTCACTGGAAAGAACAA
GCTAGAAGCGGTGAATTTCATGCCGAACCCACAGTCATTGAAAAAGAAATTAAAATACCCCACGAATTCC
ACACCTCCATGAAGGGCATCTCCTCCAAGGAGCCCCGGCAGCAGCTGGTGGAGGTCATCGGGCAGCTGGA
GGAAACCCTTCCCGAGCGCATGAGGGAGGAGCTGTCCGCCCTCACCAGAGAGGGGCAGGGTGGGCCGGGG
AGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTGCTGGTGGCAGTTCCGTGACCCTGGTTGCTGAAGTCA
ACGTCTCACAAACTGTGGATGCCGATCGGTTAGACCTGGAGGAGCTGAGCAAAGATGAGGCCAGTGAGAT
GGAGAAGGCTGTGGAGTCGGTGGTTCGGGAGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCA
GATGAGGAAGGTGGAGCGGAGGCCCCGGCTGCTGGCATTCGCTTTAGGCGTTGGGCCACCCGGGAGCTGT
ACATCCCTTCAGGCGAGAGCGAGGTTGCTGGTGGGGCCTCTCACAGCTCGGGACAGCGCACTCCCCAGGG
CCCAGTGTCGGCCACTGTGGAGGTCAGCAGCCCCACAGGCTTTGCCCAGTCACAGGTGCTGGAGGATGTG
AGCCAGGCTGCAAGGCACATAAAACTCGGCCCCTCTGAAGTCTGGAGGACTGAGCGAATGTCATATGAAG
GACCCACTGCAGAAGTGGTGGAGGTAAGTGCGGGAGGTGACCTAAGTCAGGCAGCGAGCCCGACCGGAGC
CAGCCGGTCTGTGAGGCATGTCACGCTGGGTCCCGGTCAAAGTCCACTGTCCAGAGAAGTCATCTTCCTA
GGCCCTGCCCCTGCCTGTCCAGAGGCATGGGGCTCGCCAGAACCTGGCCCAGCAGAGTCTTCTGCAGATA
TGGACGGATCAGGGAGGCACAGCACATTTGGCTGCAGACAATTTCATGCTGAAAAGGAGATTATTTTTCA
GGGCCCCATTTCTGCTGCAGGGAAGGTTGGTGATTATTTTGCAACAGAAGAGTCAGTGGGTACCCAGACT
TCTGTCAGGCAACTCCAGTTAGGCCCTAAAGAAGGGTTCAGTGGGCAAATCCAGTTCACAGCTCCACTTT
CAGACAAGGTGGAGTTGGGTGTCATAGGAGATTCTGTACACATGGAAGGGTTGCCAGGGAGCAGCACATC
CATCAGGCACATCAGCATTGGGCCTCAGAGGCATCAGACCACCCAGCAGATAGTTTACCATGGGCTGGTT
CCCCAACTGGGGGAATCTGGTGACTCAGAGAGCACTGTGCACGGAGAGGGCTCAGCAGATGTGCACCAGG
CCACTCACAGTCATACCTCGGGTAGACAAACCGTTATGACTGAAAAGAGCACCTTCCAAAGTGTCGTTTC
TGAATCTCCCCAGGAGGATAGTGCAGAGGACACATCAGGGGCAGAAATGACATCGGGTGTTAGCAGATCC
TTTAGGCACATTCGACTAGGTCCTACAGAAACGGAAACCTCTGAACACATTGCCATCCGTGGACCCGTGT
CCAGAACATTTGTGCTTGCTGGTTCAGCGGACTCCCCTGAGCTAGGCAAGTTAGCAGACAGCAGCAGAAC
GCTAAGGCACATTGCACCAGGGCCCAAAGAAACTTCGTTTACCTTTCAGATGGATGTGAGTAACGTAGAG
GCGATCCGCAGCCGGACACAGGAAGCGGGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGCGG
ACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTTAAGGCCTCTGCTGGGGAAGGAGACCAGGCCCACAG
AGAACAGGGCAAGGAGCAGGCCATGTTTGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCAAAGGTCG
GTGATTTCAGATGAAAAGAAAGTTGCCCTCCTCTATCTAGACAATGAGGAGGAGGAGAATGATGGGCATT
GGTTTTAA

Translation (1565 aa):
MLSWRLQTGPEKAELQELNARLYDYVCRVRELERENLLLEEELRGRRGREGLWAEGQARCAEEARSLRQQ
LDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGRLQAE
RRGLDAAHERDVRELRARAASLTMHFRARATGPAAPPPRLREVHDSYALLVAESWRETVQLYEDEVRELE
EALRRGQESRLQAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEYGIQAEERQRVIDCLEDEK
ATLTLAMADWLRDYQDLLQVKTGLSLEVATYRALLEGESNPEIVIWAEHVENMPSEFRNKSYHYTDSLLQ
RENERNLFSRQKAPLASFNHSSALYSNLSGHRGSQTGTSIGGDARRGFLGSGYSSSATTQQENSYGKAVS
SQTNVRTFSPTYGLLRNTEAQVKTFPDRPKAGDTREVPVYIGEDSTIARESYRDRRDKVAAGASESTRSN
ERTVILGKKTEVKATREQERNRPETIRTKPEEKMFDSKEKASEERNLRWEELTKLDKEARQRESQQMKEK
AKEKDSPKEKSVREREVPISLEVSQDRRAEVSPKGLQTPVKDAGGGTGREAEARELRFRLGTSDATGSLQ
GDSMTETVAENIVTSILKQFTQSPETEASADSFPDTKVTYVDRKELPGERKTKTEIVVESKLTEDVDVSD
EAGLDYLLSKDIKEVGLKGKSAEQMIGDIINLGLKGREGRAKVVNVEIVEEPVSYVSGEKPEEFSVPFKV
EEVEDVSPGPWGLVKEEEGYGESDVTFSVNQHRRTKQPQENTTHVEEVTEAGDSEGEQSYFVSTPDEHPG
GHDRDDGSVYGQIHIEEESTIRYSWQDEIVQGTRRRTQKDGAVGEKVVKPLDVPAPSLEGDLGSTHWKEQ
ARSGEFHAEPTVIEKEIKIPHEFHTSMKGISSKEPRQQLVEVIGQLEETLPERMREELSALTREGQGGPG
SVSVDVKKVQGAGGSSVTLVAEVNVSQTVDADRLDLEELSKDEASEMEKAVESVVRESLSRQRSPAPGSP
DEEGGAEAPAAGIRFRRWATRELYIPSGESEVAGGASHSSGQRTPQGPVSATVEVSSPTGFAQSQVLEDV
SQAARHIKLGPSEVWRTERMSYEGPTAEVVEVSAGGDLSQAASPTGASRSVRHVTLGPGQSPLSREVIFL
GPAPACPEAWGSPEPGPAESSADMDGSGRHSTFGCRQFHAEKEIIFQGPISAAGKVGDYFATEESVGTQT
SVRQLQLGPKEGFSGQIQFTAPLSDKVELGVIGDSVHMEGLPGSSTSIRHISIGPQRHQTTQQIVYHGLV
PQLGESGDSESTVHGEGSADVHQATHSHTSGRQTVMTEKSTFQSVVSESPQEDSAEDTSGAEMTSGVSRS
FRHIRLGPTETETSEHIAIRGPVSRTFVLAGSADSPELGKLADSSRTLRHIAPGPKETSFTFQMDVSNVE
AIRSRTQEAGALGVSDRGSWRDADSRNDQAVGVSFKASAGEGDQAHREQGKEQAMFDKKVQLQRMVDQRS
VISDEKKVALLYLDNEEEENDGHWF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH