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Report for CCDS73815.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73815.1 Public Homo sapiens 16 HCFC1R1 24 110 108 CCDS HistoryNCBI Gene:54985Re-query CCDS DB by CCDS ID:73815.1Re-query CCDS DB by GeneID:54985See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73815.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354679.3 ENSP00000346708.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354679.3Link to Ensembl Protein Viewer:ENSP00000346708.3Re-query CCDS DB by Nucleotide ID:ENST00000354679Re-query CCDS DB by Protein ID:ENSP00000346708
Original member Current member NCBI NM_001288667.1 NP_001275596.1 Accepted alive Link to Nucleotide Sequence:NM_001288667.1Link to Protein Sequence:NP_001275596.1Re-query CCDS DB by Nucleotide ID:NM_001288667Re-query CCDS DB by Protein ID:NP_001275596Link to BLAST:NP_001275596.1

Chromosomal Locations for CCDS 73815.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3022863 3022998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3023233 3023412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3023847 3023941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (411 nt):
ATGATCCTGCAGCAGCCCTTGCAGCGAGGCCCCCAGGGAGGGGCCCAGCGCCTCCCGCGGGCCGCCTTGG
GGGTGACTTGGGGCCTGGACGCCAGGCTGCCTCCTGTGTCAGTATCCCAGCCTGCCTCTCTGCCATCTCT
CCCCAGGGAGCCTCTGCGCAAGCAGTTTCTGTCTGAGGAGAACATGGCCACCCACTTCTCTCAACTCAGC
CTGCACAATGACCACCCCTACTGCAGCCCCCCCATGACCTTCTCCCCAGCCCTGCCCCCACTCAGGAGCC
CTTGCTCTGAGCTGCTTCTCTGGCGCTATCCTGGCAGCCTCATCCCTGAGGCCCTCCGTCTGCTGAGGCT
GGGGGACACCCCCAGTCCCCCCTACCCTGCAACCCCAGCTGGGGACATAATGGAGCTCTGA

Translation (136 aa):
MILQQPLQRGPQGGAQRLPRAALGVTWGLDARLPPVSVSQPASLPSLPREPLRKQFLSEENMATHFSQLS
LHNDHPYCSPPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLGDTPSPPYPATPAGDIMEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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