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Report for CCDS73833.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
73833.1 |
Public |
Homo sapiens |
16 |
RRN3 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:54700](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:73833.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:54700](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 16 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 73833.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000429751.6 |
ENSP00000402027.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000429751.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000402027.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000429751](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000402027](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001301064.1 |
NP_001287993.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001301064.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001287993.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001301064](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001287993](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001287993.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 73833.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1866 nt): ATGGCGGCACCGCTGCTTCACACGCGTTTGCCGGGAGATGCGGCCGCTTCGTCCTCTGCAGTTAAGAAGC TGGGCGCGTCGAGGACTGGGATTTCAAATATGCGTGCATTAGAGAATGACTTTTTCAATTCTCCCCCAAG AAAAACTGTTCGGTTTGGTGGAACTGTGACAGAAGTCTTGCTGAAGTACAAAAAGGGTGAAACAAATGAC TTTGAGTTGTTGAAGAACCAGCTGTTAGATCCAGACATAAAGAGATTGCCTTGGTTGAATAGAAGTCAAA CAGTAGTGGAAGAGTATTTGGCTTTTCTTGGTAATCTTGTATCAGCACAGACTGTTTTCCTCAGACCGTG TCTCAGCATGATTGCTTCCCATTTTGTGCCTCCCCGAGTGATCATTAAGGAAGGCGATGTAGATGTTTCA GATTCTGATGATGAAGATGATAATCTTCCTGCAAATTTTGACACATGTCACAGAGCCTTGCAAATAATAG CAAGATATGTACCATCGACACCGTGGTTTCTCATGCCAATACTGGTGGAAAAATTTCCATTTGTTCGAAA ATCAGAGAGAACACTGGAATGTTACGTTCATAACTTACTAAGGATTAGTGTATATTTTCCAACCTTGAGG CATGAAATTCTGGAGCTTATTATTGAAAAACTACTCAAGTTGGATGTGAATGCATCCCGGCAGGGTATTG AAGATGCTGAAGAAACAGCAACTCAAACTTGTGGTGGGACAGATTCCACGGAAGGATTGTTTAATATGGA TGAAGATGAAGAAACTGAACATGAAACAAAGGCTGGTCCTGAACGGCTCGACCAGATGGTGCATCCTGTA GCCGAGCGCCTGGACATCCTGATGTCTTTGGTTTTGTCCTACATGAAGGATGTCTGCTATGTAGATGGTA AGGTTGATAACGGCAAAACAAAGGATCTATATCGCGACCTGATAAACATCTTTGACAAACTCCTGTTGCC CACCCATGCCTCCTGCCATGTACAGTTTTTCATGTTTTACCTCTGTAGTTTCAAATTGGGATTCGCAGAG GCATTTTTGGAACATCTCTGGAAAAAATTGCAGGACCCAAGTAATCCTGCCATCATCAGGCAGGCTGCTG GAAATTATATTGGAAGCTTTTTGGCAAGAGCTAAATTTATTCCTCTTATTACTGTAAAATCATGCCTAGA TCTTTTGGTTAACTGGCTGCACATATACCTTAATAACCAGGATTCGGGAACAAAGGCATTCTGCGATGTT GCTCTCCATGGACCATTTTACTCAGCCTGCCAAGCTGTGTTCTACACCTTTGTTTTTAGACACAAGCAGC TTTTGAGCGGAAACCTGAAAGAAGGTTTGCAGTATCTTCAGAGTCTGAATTTTGAGCGGATAGTGATGAG CCAGCTAAATCCCCTGAAGATTTGCCTGCCCTCAGTGGTTAACTTTTTTGCTGCAATCACAAATAAGTAC CAGCTCGTCTTCTGCTACACCATCATTGAGAGGAACAATCGCCAGATGCTGCCAGTCATTAGGAGTACCG CTGGAGGAGACTCAGTGCAGATCTGCACAAACCCGCTGGACACCTTCTTCCCCTTTGATCCCTGTGTGCT GAAGAGGTCAAAGAAATTCATTGATCCTATTTATCAGGTGTGGGAAGACATGAGTGCTGAAGAGCTACAG GAGTTCAAGAAACCCATGAAAAAGGACATAGTGGAAGATGAAGATGATGACTTTCTGAAAGGCGAAGTGC CCCAGAATGATACCGTGATTGGGATCACACCAAGCTCCTTTGACACGCATTTCCGAAGTCCTTCAAGTAG TGTGGGCTCCCCACCCGTGTTGTACATGCAACCCAGTCCCCTCTGA
Translation (621 aa): MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVLLKYKKGETND FELLKNQLLDPDIKRLPWLNRSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVS DSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGPERLDQMVHPV AERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMFYLCSFKLGFAE AFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLLVNWLHIYLNNQDSGTKAFCDV ALHGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKY QLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQ EFKKPMKKDIVEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
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