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Report for CCDS73932.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73932.1 Public Homo sapiens 16 GAS8 24 110 108 CCDS HistoryNCBI Gene:2622Re-query CCDS DB by CCDS ID:73932.1Re-query CCDS DB by GeneID:2622See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73932.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000620723.4 ENSP00000482877.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620723.4Link to Ensembl Protein Viewer:ENSP00000482877.1Re-query CCDS DB by Nucleotide ID:ENST00000620723Re-query CCDS DB by Protein ID:ENSP00000482877
Original member Current member NCBI NM_001286205.2 NP_001273134.1 Accepted alive Link to Nucleotide Sequence:NM_001286205.2Link to Protein Sequence:NP_001273134.1Re-query CCDS DB by Nucleotide ID:NM_001286205Re-query CCDS DB by Protein ID:NP_001273134Link to BLAST:NP_001273134.1

Chromosomal Locations for CCDS 73932.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 90031458 90031496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90032718 90032924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90035633 90035687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90036381 90036586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90037232 90037399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90037762 90037848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90040300 90040509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90042470 90042535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90043196 90043345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1188 nt):
ATGGAAGAAGCCGAGGAGAGGCACCAGGTGGAGATCAAGGTGTACAAGCAGAAAGTGAAGCACCTGCTAT
ATGAGCACCAGAACAACCTGACAGAGATGAAGGCTGAGGGCACTGTAGTCATGAAGCTGGCACAGAAAGA
GCACCGCATACAGGAGAGTGTGCTGCGCAAGGACATGCGGGCACTGAAGGTGGAGCTCAAGGAGCAGGAG
CTGGCCAGTGAGGTGGTGGTGAAGAACCTGCGGCTGAAACACACCGAGGAGATCACCAGGATGCGGAATG
ATTTTGAGAGGCAAGTTCGAGAAATTGAGGCCAAGTATGATAAGAAGATGAAGATGCTGAGGGACGAACT
CGACTTGCGGAGAAAGACTGAGCTCCACGAAGTGGAGGAGAGGAAGAATGGCCAGATCCACACGCTGATG
CAGCGCCACGAGGAGGCCTTCACCGACATTAAGAACTACTACAACGACATCACCCTCAACAACCTGGCCC
TCATCAACTCCCTCAAGGAGCAGATGGAGGACATGCGGAAGAAGGAGGACCACCTGGAGAGGGAGATGGC
AGAGGTGTCTGGGCAGAACAAGCGCCTGGCAGACCCTCTCCAGAAGGCTCGGGAGGAGATGAGCGAGATG
CAGAAACAGCTCGCAAACTACGAGAGGGACAAGCAGATCCTGCTTTGCACAAAAGCCCGTTTGAAAGTCA
GGGAGAAAGAGCTGAAAGACCTGCAGTGGGAGCATGAAGTGTTAGAGCAGCGATTCACCAAGGTGCAGCA
GGAGCGGGACGAGCTCTATCGGAAGTTCACCGCAGCCATCCAGGAGGTGCAGCAGAAGACAGGGTTCAAG
AACCTCGTGCTAGAACGCAAGCTGCAGGCTCTGAGCGCCGCTGTGGAGAAGAAGGAGGTGCAGTTCAACG
AGGTCCTGGCTGCCTCTAACCTGGACCCTGCAGCCCTGACGCTGGTGTCCCGCAAGCTGGAGGATGTTCT
TGAGTCGAAGAACAGCACCATCAAGGACCTGCAGTATGAGCTGGCCCAGGTCTGTAAGGCCCATAACGAC
CTGCTGCGCACGTATGAGGCAAAGCTGCTGGCCTTCGGGATCCCTCTGGACAACGTGGGCTTCAAGCCCT
TGGAAACAGCTGTGATCGGACAGACACTGGGCCAGGGCCCCGCGGGACTGGTGGGCACCCCGACGTAG

Translation (395 aa):
MEEAEERHQVEIKVYKQKVKHLLYEHQNNLTEMKAEGTVVMKLAQKEHRIQESVLRKDMRALKVELKEQE
LASEVVVKNLRLKHTEEITRMRNDFERQVREIEAKYDKKMKMLRDELDLRRKTELHEVEERKNGQIHTLM
QRHEEAFTDIKNYYNDITLNNLALINSLKEQMEDMRKKEDHLEREMAEVSGQNKRLADPLQKAREEMSEM
QKQLANYERDKQILLCTKARLKVREKELKDLQWEHEVLEQRFTKVQQERDELYRKFTAAIQEVQQKTGFK
NLVLERKLQALSAAVEKKEVQFNEVLAASNLDPAALTLVSRKLEDVLESKNSTIKDLQYELAQVCKAHND
LLRTYEAKLLAFGIPLDNVGFKPLETAVIGQTLGQGPAGLVGTPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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