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Report for CCDS74123.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74123.1 Public Homo sapiens 17 MARCHF10 24 110 108 CCDS HistoryNCBI Gene:162333Re-query CCDS DB by CCDS ID:74123.1Re-query CCDS DB by GeneID:162333See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74123.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000583600.5 ENSP00000463080.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000583600.5Link to Ensembl Protein Viewer:ENSP00000463080.1Re-query CCDS DB by Nucleotide ID:ENST00000583600Re-query CCDS DB by Protein ID:ENSP00000463080
Original member Current member NCBI NM_001288779.2 NP_001275708.1 Accepted alive Link to Nucleotide Sequence:NM_001288779.2Link to Protein Sequence:NP_001275708.1Re-query CCDS DB by Nucleotide ID:NM_001288779Re-query CCDS DB by Protein ID:NP_001275708Link to BLAST:NP_001275708.1

Chromosomal Locations for CCDS 74123.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 62701703 62701758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62705539 62705581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62711231 62711344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62722488 62722597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62724938 62725104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62735931 62737332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62744376 62744528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62746865 62746978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62759835 62760006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62788480 62788599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62801646 62801735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2541 nt):
ATGTTGCATGACGCAAGGGACAGGCAGAAGTTCTTCAGCGATGTTCAGTATCTGCGGGACATGCAGCATA
AGGTGGACTCTGAGTATCAGGCTTGTCTGAGACGACAGGAATATAGAAGAGACCCAAATGAGAAGAAACG
CGATCAGTTTTGGGGGCAAGAGACAAGTTTTGAGAGATCCCGGTTTTCTAGCAGGTCATCTTCCAAACAG
AGTTCTAGTGAGGAGGATGCTCTAACTGAACCAAGGTCATCTATCAAGATATCTGCATTTAAGTGTGACT
CCAAACTTCCAGCAATTGACCAAACATCAGTCAAGCAGAAACATAAAAGTACCATGACTGTAAGGAAAGC
AGAGAAAGTGGACCCCAGCGAACCCTCTCCAGCAGAGTCAGAGCCGACTTGGTGGAATAAACCGGAAACA
GACCTCGGAGGACCTTCTGGCTGGTGCAGTCTGGGGAAGAAAGGTCCCATGAGCAGAAGCATCCCTCCCT
GTGAAGCAGACCAAGCACCAATGGTTTTATTAAGAAAGAGGAAGCCAAACCTGAGGAGATTTACAGTCAG
CCCAGAATCGCACAGCCCGAGAGCATCTGGGGACAGAAGCAGACAGAAACAGCAGTGGCCTGCAAAGGTG
CCGGTTCCCAGGGGAGCAGATCAAGTAGTTCAACAAGAAGGCCTGATGTGTAACACTAAGCTGAAGAGGC
CAAATCAAGAGAGAAGAAACTTGGTCCCATCGTCACAGCCAATGACTGAGAACGCCCCTGATAGAGCCAA
AAAAGGAGACCCGAGTGCTCCTTCCCAGAGTGAGCTGCATCCAGCCCTGTCCCAGGCCTTCCAAGGAAAA
AATAGTCCTCAAGTATTGAGTGAGTTCTCGGGGCCACCACTCACACCCACCACTGTAGGAGGGCCAAGAA
AGGCATCATTTAGGTTCCGAGATGAAGACTTTTATTCCATTTTGTCATTGAACAGCAGAAGAGAAAGCGA
TGACACTGAAGAGGAAACCCAGTCTGAAGAATGTCTGTGGGTTGGTGTGCGCTCACCCTGTTCTCCTTCC
CATCACAAAAGAAGTAGATTTGGGGGGACATCGACCCCTCAGGCCAAAAATAAAAATTTTGAAGAAAATG
CTGAAAATTGCAGAGGTCATTCTTCAAGAAGAAGTGAGCCCAGTCATGGCTCATTGAGAATAAGCAATGC
AATGGAGCCAGCAACAGAGCGGCCTTCTGCTGGGCAAAGGTTGTCCCAAGACCCCGGGCTGCCTGATAGG
GAATCTGCTACAGAGAAGGACAGAGGTGGCAGTGAAAATGCGAAAAAGAGCCCTCTTTCGTGGGACACCA
AATCCGAGCCCAGACAAGAGGTTGGTGTCAATGCTGAAAATGTATGGAGTGATTGTATTTCTGTGGAACA
TAGGCCTGGCACCCATGATTCTGAAGGATACTGGAAAGACTATTTAAACAGTTCTCAAAATTCTCTTGAC
TACTTTATTTCTGGCAGACCAATATCTCCAAGATCATCAGTGAATTCATCCTATAACCCTCCTGCATCAT
TCATGCATTCTGCTCTGAGAGATGATATTCCAGTAGACTTGTCAATGTCATCGACTTCAGTTCACAGCTC
AGACTCAGAGGGAAACTCAGGGTTTCATGTTTGCCAACCACTGTCTCCCATTAGAAATAGGACTCCATTT
GCCAGTGCCGAAAACCATAATTATTTCCCAGTAAACAGTGCACACGAATTTGCTGTCAGGGAAGCAGAAG
ATACTACTTTAACAAGCCAGCCTCAGGGGGCTCCACTATATACAGATCTCTTACTAAATCCACAGGGCAA
TTTGTCCTTAGTGGATTCTTCCAGCTCCTCTCCATCAAGAATGAACTCAGAAGGCCATTTGCATGTGTCT
GGGTCTCTGCAAGAAAATACACCATTTACTTTCTTTGCAGTGTCTCATTTCCCAAATCAAAATGATAATG
GGAGCAGGATGGCAGCCTCTGGTTTCACAGATGAAAAGGAAACCAGTAAGATAAAGGCAGACCCTGAGAA
ACTCAAGAAATTGCAAGAAAGTCTCCTGGAGGAGGACTCCGAGGAGGAGGGAGACTTGTGTCGCATCTGT
CAGATAGCCGGGGGTTCCCCAAGCAACCCCCTCCTGGAGCCTTGCGGCTGTGTGGGAAGCCTGCAGTTTG
TTCATCAAGAGTGCCTGAAAAAGTGGCTGAAAGTGAAAATAACATCAGGAGCAGATCTTGGTGCCGTGAA
GACCTGTGAGATGTGTAAGCAAGGCCTGCTGGTTGACCTGGGTGACTTTAACATGATTGAGTTCTACCAG
AAGCACCAGCAATCTCAGGCACAAAACGAGCTGATGAATTCAGGCTTGTACCTGGTGCTGCTGCTTCACC
TCTATGAGCAGAGGTTTGCAGAACTCATGAGGCTCAACCACAACCAGGTGGAAAGAGAGAGGTTGTCAAG
AAATTACCCACAACCCAGAACAGAGGAAAATGAAAATTCGGAGTTGGGAGATGGAAATGAAGGCAGCATT
TCTCAAAGCCAGGTCGTCTAG

Translation (846 aa):
MLHDARDRQKFFSDVQYLRDMQHKVDSEYQACLRRQEYRRDPNEKKRDQFWGQETSFERSRFSSRSSSKQ
SSSEEDALTEPRSSIKISAFKCDSKLPAIDQTSVKQKHKSTMTVRKAEKVDPSEPSPAESEPTWWNKPET
DLGGPSGWCSLGKKGPMSRSIPPCEADQAPMVLLRKRKPNLRRFTVSPESHSPRASGDRSRQKQQWPAKV
PVPRGADQVVQQEGLMCNTKLKRPNQERRNLVPSSQPMTENAPDRAKKGDPSAPSQSELHPALSQAFQGK
NSPQVLSEFSGPPLTPTTVGGPRKASFRFRDEDFYSILSLNSRRESDDTEEETQSEECLWVGVRSPCSPS
HHKRSRFGGTSTPQAKNKNFEENAENCRGHSSRRSEPSHGSLRISNAMEPATERPSAGQRLSQDPGLPDR
ESATEKDRGGSENAKKSPLSWDTKSEPRQEVGVNAENVWSDCISVEHRPGTHDSEGYWKDYLNSSQNSLD
YFISGRPISPRSSVNSSYNPPASFMHSALRDDIPVDLSMSSTSVHSSDSEGNSGFHVCQPLSPIRNRTPF
ASAENHNYFPVNSAHEFAVREAEDTTLTSQPQGAPLYTDLLLNPQGNLSLVDSSSSSPSRMNSEGHLHVS
GSLQENTPFTFFAVSHFPNQNDNGSRMAASGFTDEKETSKIKADPEKLKKLQESLLEEDSEEEGDLCRIC
QIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCKQGLLVDLGDFNMIEFYQ
KHQQSQAQNELMNSGLYLVLLLHLYEQRFAELMRLNHNQVERERLSRNYPQPRTEENENSELGDGNEGSI
SQSQVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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