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Report for CCDS7415.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7415.1 Public Homo sapiens 10 HECTD2 24 110 108 CCDS HistoryNCBI Gene:143279Re-query CCDS DB by CCDS ID:7415.1Re-query CCDS DB by GeneID:143279See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7415.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371681.8 ENSP00000360746.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371681.8Link to Ensembl Protein Viewer:ENSP00000360746.4Re-query CCDS DB by Nucleotide ID:ENST00000371681Re-query CCDS DB by Protein ID:ENSP00000360746
Original member Current member NCBI NM_173497.4 NP_775768.4 Accepted alive Link to Nucleotide Sequence:NM_173497.4Link to Protein Sequence:NP_775768.4Re-query CCDS DB by Nucleotide ID:NM_173497Re-query CCDS DB by Protein ID:NP_775768Link to BLAST:NP_775768.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775768.4 207 Q5U5R9-2 207 100% 0 0

Chromosomal Locations for CCDS 7415.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 91410439 91410576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91425281 91425410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91460427 91460565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91461254 91461356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91462095 91462208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGAGTGAGGCGGTTCGGGTACCCTCGCCCGCCACTCCGCTGGTGGTGGCGGCGCCCGCGCCTGAGGAGA
GGAAAGGGAAGGAGTCAGAGCGCGAGAAGCTGCCGCCCATCGTATCGGCGGGCGCCGGCGCGACCGCGGG
TTTGGACAGAGGAGCCAAAGGCCAAATTTCCACTTTCAGCAGTTTTATTTCAGCTGTTAGCCCGAAGAAA
GAAGCTGCTGAAAACAGAAGTTCACCTGCACATCTTGTTTTCCCTAACATCAAGAATGTGAGAGAACCAC
CACCAATTTGCCTTGATGTTAGACAAAAACAGCGTACATCTATGGATGCATCATCATCCGAAATGAAGGC
CCCAGTCCTTCCAGAACCTATTCTTCCTATCCAGCCCAAAACTGTGAAAGACTTTCAGGAAGATGTAGAA
AAAGTTAAGTCATCAGGAGATTGGAAAGCAGTACATGATTTTTATCTAACAACGTTTGATTCTTTCCCAG
AATTAAATGCTGCATTTAAGAAAGATGCCACTGCCTCATTTAACACCATTGAAGACTCTGGGATTAATGC
TAAATTTGTGAATGCTGTGTATGATACCTTACTTAATACTGTAAGTATTATGACATGCAAGTAA

Translation (207 aa):
MSEAVRVPSPATPLVVAAPAPEERKGKESEREKLPPIVSAGAGATAGLDRGAKGQISTFSSFISAVSPKK
EAAENRSSPAHLVFPNIKNVREPPPICLDVRQKQRTSMDASSSEMKAPVLPEPILPIQPKTVKDFQEDVE
KVKSSGDWKAVHDFYLTTFDSFPELNAAFKKDATASFNTIEDSGINAKFVNAVYDTLLNTVSIMTCK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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