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Report for CCDS74152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74152.1 Public Homo sapiens 17 CD300LF 24 110 108 CCDS HistoryNCBI Gene:146722Re-query CCDS DB by CCDS ID:74152.1Re-query CCDS DB by GeneID:146722See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74152.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000583937.5 ENSP00000462309.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000583937.5Link to Ensembl Protein Viewer:ENSP00000462309.1Re-query CCDS DB by Nucleotide ID:ENST00000583937Re-query CCDS DB by Protein ID:ENSP00000462309
Original member Current member NCBI NM_001289084.2 NP_001276013.1 Accepted alive Link to Nucleotide Sequence:NM_001289084.2Link to Protein Sequence:NP_001276013.1Re-query CCDS DB by Nucleotide ID:NM_001289084Re-query CCDS DB by Protein ID:NP_001276013Link to BLAST:NP_001276013.1

Chromosomal Locations for CCDS 74152.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74695096 74695251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74695725 74695859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74696195 74696217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74698369 74698481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74703035 74703143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74704478 74704816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74712824 74712866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGCCCCTGCTGACACTCTACCTGCTCCTCTTCTGGCTCTCAGGCTACTCCATTGTCACTCAAATCACCG
GTCCAACAACAGTGAATGGCTTGGAGCGGGGCTCCTTGACCGTGCAGTGTGTTTACAGATCAGGCTGGGA
GACCTACTTGAAGTGGTGGTGTCGAGGAGCTATTTGGCGTGACTGCAAGATCCTTGTTAAAACCAGTGGG
TCAGAGCAGGAGGTGAAGAGGGACCGGGTGTCCATCAAGGACAATCAGAAAAACCGCACGTTCACTGTGA
CCATGGAGGATCTCATGAAAACTGATGCTGACACTTACTGGTGTGGAATTGAGAAAACTGGAAATGACCT
TGGGGTCACAGTTCAAGTGACCATTGACCCAGCGTCGACTCCTGCCCCCACCACGCCTACCTCCACTACG
TTTACAGCACCAGTCACCCAAGAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCACCACTTGGACAACA
GGCACAAGCTCCTGAAGCTCAGTGTCCTCCTGCCCCTCATCTTCACCATATTGCTGCTGCTTTTGGTGGC
CGCCTCACTCTTGGCTTGGAGGATGATGAAGTACCAGCAGAAAGCAGCCGGGATGTCCCCAGAGCAGGTA
CTGCAGCCCCTGGAGGGCGACCTCTGCTATGCAGACCTGACCCTGCAGCTGGCCGGAACCTCCCCGCAAA
AGGCTACCACGAAGCTTTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTT
GCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAAC
ATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGGCCCTGAGGAGCCCACGGAATACAGCACCATCAGCA
GGCCTTAG

Translation (305 aa):
MPLLTLYLLLFWLSGYSIVTQITGPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSG
SEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVTVQVTIDPASTPAPTTPTSTT
FTAPVTQEETSSSPTLTGHHLDNRHKLLKLSVLLPLIFTILLLLLVAASLLAWRMMKYQQKAAGMSPEQV
LQPLEGDLCYADLTLQLAGTSPQKATTKLSSAQVDQVEVEYVTMASLPKEDISYASLTLGAEDQEPTYCN
MGHLSSHLPGRGPEEPTEYSTISRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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