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Report for CCDS74212.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74212.1 Public Homo sapiens 18 C18orf21 24 110 108 CCDS HistoryNCBI Gene:83608Re-query CCDS DB by CCDS ID:74212.1Re-query CCDS DB by GeneID:83608See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74212.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000618334.1 ENSP00000483334.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618334.1Link to Ensembl Protein Viewer:ENSP00000483334.1Re-query CCDS DB by Nucleotide ID:ENST00000618334Re-query CCDS DB by Protein ID:ENSP00000483334
Original member Current member NCBI NM_001201476.2 NP_001188405.1 Accepted alive Link to Nucleotide Sequence:NM_001201476.2Link to Protein Sequence:NP_001188405.1Re-query CCDS DB by Nucleotide ID:NM_001201476Re-query CCDS DB by Protein ID:NP_001188405Link to BLAST:NP_001188405.1

Chromosomal Locations for CCDS 74212.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 35972729 35972805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 35972885 35972907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 35974896 35975095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 35978835 35978927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGAGACAGAAGCACTACCTTGAGGCTGCAGCGCGGGGACTGCACGACAGCTGCCCGGGCCAAGCCCGCT
ACCTCCTCTGGGCCTACACTTCGTCGCACGATGATAAGAGCACTTTTGAAGAAACGTGTCCATACTGTTT
CCAGCTGTTGGTTCTGGATAACTCTCGAGTGCGTCTCAAACCCAAAGCCAGGTTGACACCCAAAATACAG
AAACTTCTTAATCGAGAAGCGAGAAACTATACACTCAGTTTTAAAGAAGCAAAAATGGTGAAAAAGTTCA
AAGACTCCAAAAGTGTATTGAACACCTACATCTGGACAGTCAGTATCTACTTGCTCCTCAAAGAACACCA
GCAAAACAAAGAAACACTTCTCTCAACTAAAAATGTTACTTAG

Translation (130 aa):
MRQKHYLEAAARGLHDSCPGQARYLLWAYTSSHDDKSTFEETCPYCFQLLVLDNSRVRLKPKARLTPKIQ
KLLNREARNYTLSFKEAKMVKKFKDSKSVLNTYIWTVSIYLLLKEHQQNKETLLSTKNVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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