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Report for CCDS74234.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74234.1 Public Homo sapiens 18 ZNF516 24 110 108 CCDS HistoryNCBI Gene:9658Re-query CCDS DB by CCDS ID:74234.1Re-query CCDS DB by GeneID:9658See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74234.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000443185.7 ENSP00000394757.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000443185.7Link to Ensembl Protein Viewer:ENSP00000394757.2Re-query CCDS DB by Nucleotide ID:ENST00000443185Re-query CCDS DB by Protein ID:ENSP00000394757
Original member Current member NCBI NM_014643.4 NP_055458.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014643.4Link to Protein Sequence:NP_055458.1Re-query CCDS DB by Nucleotide ID:NM_014643Re-query CCDS DB by Protein ID:NP_055458Link to BLAST:NP_055458.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055458.1 1163 Q92618 1163 100% 0 0

Chromosomal Locations for CCDS 74234.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 76362498 76362557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76370528 76370595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76371467 76371571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76378855 76380303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76441245 76443054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3492 nt):
ATGGATCGCAACAGAGAGGCCGAGATGGAGCTGAGGCGAGGCCCCAGCCCCACCAGGGCCGGCCGGGGCC
ACGAGGTGGATGGGGACAAGGCTACCTGCCACACCTGCTGCATCTGCGGCAAGAGCTTCCCCTTCCAGAG
CTCGCTTTCGCAGCACATGCGCAAGCACACGGGCGAGAAGCCCTACAAGTGTCCCTACTGCGACCACCGG
GCTTCCCAGAAGGGCAACCTGAAGATTCACATCCGGAGCCACCGCACGGGGACTCTGATTCAGGGACACG
AGCCGGAGGCGGGCGAGGCGCCGCTGGGTGAGATGCGCGCCTCCGAGGGCCTGGACGCCTGCGCCAGCCC
CACCAAGAGCGCCTCGGCCTGCAACCGGCTGCTGAACGGGGCCTCGCAGGCCGACGGCGCCAGGGTCCTG
AACGGGGCCTCGCAGGCCGACAGCGGCAGAGTCCTGCTGCGGAGCAGCAAGAAGGGGGCAGAGGGGTCCG
CATGCGCCCCGGGGGAGGCCAAGGCAGCGGTCCAGTGCTCCTTCTGCAAGAGCCAGTTCGAGCGTAAGAA
GGACCTGGAGCTGCACGTGCACCAGGCGCACAAGCCGTTCAAGTGCAGGCTGTGCAGCTACGCGACGCTG
CGGGAGGAGTCGCTGCTGAGCCACATCGAGAGGGACCACATCACCGCGCAGGGGCCCGGCAGCGGCGAGG
CCTGCGTGGAGAACGGCAAGCCCGAGCTGAGCCCCGGGGAGTTCCCGTGCGAGGTGTGTGGCCAGGCCTT
CAGCCAGACCTGGTTCCTGAAGGCGCACATGAAGAAGCACCGGGGCTCCTTCGACCACGGCTGCCACATC
TGCGGCCGTAGGTTCAAGGAGCCCTGGTTCCTCAAGAACCACATGAAGGCGCACGGCCCCAAGACGGGCA
GCAAGAACAGGCCCAAGAGTGAGCTGGACCCCATCGCCACCATCAACAACGTGGTCCAGGAGGAGGTGAT
CGTCGCCGGCCTGAGCCTCTACGAGGTCTGCGCCAAGTGCGGGAACCTGTTTACAAACCTGGACAGCTTG
AACGCCCACAATGCCATCCACCGCAGAGTCGAGGCCAGCCGCACGCGCGCCCCGGCCGAGGAGGGGGCGG
AGGGGCCCTCGGACACCAAGCAGTTCTTCCTCCAGTGCCTGAACCTGAGGCCGTCGGCGGCCGGCGACTC
GTGCCCTGGCACGCAGGCCGGACGGCGGGTGGCTGAGCTGGACCCGGTCAACAGCTACCAGGCCTGGCAG
CTGGCCACGCGGGGTAAGGTGGCCGAGCCGGCCGAGTACCTCAAGTACGGGGCCTGGGACGAGGCGCTGG
CCGGGGACGTGGCCTTCGACAAGGACAGGCGCGAGTACGTCCTGGTGAGCCAGGAGAAGCGCAAGCGTGA
GCAGGATGCACCAGCCGCGCAGGGGCCCCCGCGGAAGCGCGCGAGCGGGCCTGGGGACCCCGCGCCCGCC
GGCCACCTCGATCCCCGCTCGGCCGCGCGCCCCAACCGCAGGGCCGCAGCCACCACCGGCCAGGGCAAGT
CCTCCGAGTGCTTCGAGTGCGGCAAGATCTTCCGCACCTATCATCAGATGGTGCTGCACTCACGCGTGCA
TCGCCGCGCGCGCCGCGAGAGGGACAGTGACGGGGACAGGGCGGCGCGGGCCCGCTGCGGATCACTCAGT
GAGGGTGACTCGGCCTCCCAGCCCAGCAGCCCTGGCTCCGCCTGTGCCGCTGCTGACTCCCCGGGCTCTG
GCCTGGCCGACGAGGCTGCCGAAGACAGTGGTGAGGAGGGCGCCCCTGAACCTGCACCAGGGGGACAGCC
GCGCCGCTGCTGCTTTTCCGAAGAGGTGACTTCGACCGAGCTCTCCAGTGGAGACCAGAGTCACAAGATG
GGAGATAACGCCTCGGAAAGAGACACCGGCGAGTCCAAGGCAGGGATCGCAGCTTCTGTGTCCATACTTG
AAAACAGTAGCAGAGAGACTTCTAGAAGGCAAGAGCAGCACAGATTTTCTATGGACTTAAAGATGCCAGC
ATTTCACCCCAAGCAGGAGGTGCCCGTCCCTGGTGATGGTGTGGAGTTCCCTTCCAGTACGGGAGCGGAG
GGCCAGACGGGTCACCCTGCAGAAAAGCTGTCCGATTTGCACAACAAGGAACACTCTGGGGGAGGGAAGC
GGGCGCTGGCCCCAGACCTCATGCCGCTAGATTTAAGTGCGAGGTCGACGCGGGATGACCCCAGCAATAA
GGAGACGGCCTCCTCCCTGCAGGCGGCTTTAGTCGTTCACCCGTGTCCTTACTGCAGCCACAAGACCTAC
TACCCCGAGGTCCTGTGGATGCACAAACGCATCTGGCACCGCGTCAGCTGCAACTCCGTGGCTCCCCCGT
GGATTCAGCCCAATGGTTACAAAAGCATCAGAAGCAATTTGGTTTTCCTTTCCCGGAGCGGACGCACGGG
CCCCCCGCCTGCCCTCGGTGGCAAAGAATGCCAGCCTTTGCTCCTTGCTCGGTTCACCCGCACTCAGGTG
CCAGGGGGGATGCCGGGGTCCAAAAGTGGCTCTTCTCCCCTGGGAGTGGTCACAAAAGCCGCTAGCATGC
CTAAGAATAAGGAGAGCCATTCCGGAGGTCCCTGCGCTCTGTGGGCGCCCGGCCCTGACGGGTATCGACA
GACCAAACCTTGTCACGGCCAGGAGCCACATGGCGCGGCCACACAGGGGCCCCTGGCCAAGCCCAGGCAG
GAGGCTAGCTCCAAACCGGTGCCTGCCCCGGGTGGCGGGGGCTTCAGCAGGAGCGCCACCCCTACGCCCA
CCGTCATCGCCCGGGCTGGCGCGCAGCCCTCGGCCAATAGCAAGCCTGTGGAGAAGTTTGGGGTCCCCCC
AGCGGGGGCTGGCTTTGCCCCCACAAATAAGCACAGTGCCCCGGACTCCCTGAAAGCCAAATTCAGTGCT
CAGCCTCAGGGTCCACCTCCTGCAAAGGGCGAAGGGGGCGCTCCTCCTCTACCTCCCCGCGAGCCCCCCT
CGAAGGCAGCCCAGGAGCTGAGGACTCTGGCCACCTGTGCTGCGGGGTCCAGGGGCGACGCGGCCTTGCA
GGCCCAGCCCGGCGTGGCTGGGGCGCCCCCCGTCCTACACTCCATCAAACAGGAGCCGGTGGCCGAGGGG
CATGAGAAGCGCCTGGACATCCTCAACATCTTTAAGACGTACATTCCAAAGGACTTTGCGACCCTCTACC
AGGGATGGGGTGTCAGCGGCCCTGGGTTGGAGCACAGAGGGACACTCCGGACGCAGGCCCGGCCAGGAGA
GTTCGTCTGCATCGAGTGCGGAAAGAGCTTCCACCAGCCCGGCCACCTCAGGGCCCACATGCGGGCACAC
TCAGTGGTGTTTGAGTCCGATGGGCCTCGGGGTTCTGAAGTTCATACCACCTCCGCAGACGCCCCCAAAC
AAGGGAGAGACCATTCTAACACAGGTACCGTCCAGACAGTGCCTCTGAGAAAGGGAACCTAA

Translation (1163 aa):
MDRNREAEMELRRGPSPTRAGRGHEVDGDKATCHTCCICGKSFPFQSSLSQHMRKHTGEKPYKCPYCDHR
ASQKGNLKIHIRSHRTGTLIQGHEPEAGEAPLGEMRASEGLDACASPTKSASACNRLLNGASQADGARVL
NGASQADSGRVLLRSSKKGAEGSACAPGEAKAAVQCSFCKSQFERKKDLELHVHQAHKPFKCRLCSYATL
REESLLSHIERDHITAQGPGSGEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHI
CGRRFKEPWFLKNHMKAHGPKTGSKNRPKSELDPIATINNVVQEEVIVAGLSLYEVCAKCGNLFTNLDSL
NAHNAIHRRVEASRTRAPAEEGAEGPSDTKQFFLQCLNLRPSAAGDSCPGTQAGRRVAELDPVNSYQAWQ
LATRGKVAEPAEYLKYGAWDEALAGDVAFDKDRREYVLVSQEKRKREQDAPAAQGPPRKRASGPGDPAPA
GHLDPRSAARPNRRAAATTGQGKSSECFECGKIFRTYHQMVLHSRVHRRARRERDSDGDRAARARCGSLS
EGDSASQPSSPGSACAAADSPGSGLADEAAEDSGEEGAPEPAPGGQPRRCCFSEEVTSTELSSGDQSHKM
GDNASERDTGESKAGIAASVSILENSSRETSRRQEQHRFSMDLKMPAFHPKQEVPVPGDGVEFPSSTGAE
GQTGHPAEKLSDLHNKEHSGGGKRALAPDLMPLDLSARSTRDDPSNKETASSLQAALVVHPCPYCSHKTY
YPEVLWMHKRIWHRVSCNSVAPPWIQPNGYKSIRSNLVFLSRSGRTGPPPALGGKECQPLLLARFTRTQV
PGGMPGSKSGSSPLGVVTKAASMPKNKESHSGGPCALWAPGPDGYRQTKPCHGQEPHGAATQGPLAKPRQ
EASSKPVPAPGGGGFSRSATPTPTVIARAGAQPSANSKPVEKFGVPPAGAGFAPTNKHSAPDSLKAKFSA
QPQGPPPAKGEGGAPPLPPREPPSKAAQELRTLATCAAGSRGDAALQAQPGVAGAPPVLHSIKQEPVAEG
HEKRLDILNIFKTYIPKDFATLYQGWGVSGPGLEHRGTLRTQARPGEFVCIECGKSFHQPGHLRAHMRAH
SVVFESDGPRGSEVHTTSADAPKQGRDHSNTGTVQTVPLRKGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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