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Report for CCDS74279.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74279.1 Public Homo sapiens 19 ZNF426 24 110 108 CCDS HistoryNCBI Gene:79088Re-query CCDS DB by CCDS ID:74279.1Re-query CCDS DB by GeneID:79088See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74279.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000593003.5 ENSP00000468100.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593003.5Link to Ensembl Protein Viewer:ENSP00000468100.1Re-query CCDS DB by Nucleotide ID:ENST00000593003Re-query CCDS DB by Protein ID:ENSP00000468100
Original member Current member NCBI NM_001300883.3 NP_001287812.1 Accepted alive Link to Nucleotide Sequence:NM_001300883.3Link to Protein Sequence:NP_001287812.1Re-query CCDS DB by Nucleotide ID:NM_001300883Re-query CCDS DB by Protein ID:NP_001287812Link to BLAST:NP_001287812.1

Chromosomal Locations for CCDS 74279.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 9528380 9529636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9530985 9531067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9532845 9532925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9533840 9533966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9536208 9536210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1551 nt):
ATGGATTCAGTGACCTTTGACGATGTGGCTGTGGACTTCACCCAGGAGGAGTGGACTTTACTGGACTCAA
CTCAGAGAAGCCTCTACAGTGACGTGATGCTGGAGAACTACAAGAACCTGGCCACAGTAGGAGGTCAGAT
CATCAAACCCAGTCTAATCTCTTGGTTGGAACAAGAAGAGTCAAGGACAGTTCAGGGAGGAGTTCTCCAA
GGATGGGAAATGCGACTTGAAACCCAGTGGTCTATACTTCAGCAGGACTTTTTGAGGGGTCAGACATCCA
TTGGGATACAATTGGAAGGAAAACACAATGGAAGGGAACTCTGTGACTGTGAGCAATGTGGAGAAGTCTT
CAGTGAACACTCATGCCTTAAGACGCACGTGAGAACTCAAAGTACAGGGAACACTCATGACTGTAATCAG
TATGGAAAAGATTTCCTTACCCTGTGTGAGAAAACCTCTACTGGTGAGAAACTTTCTGAGTTTAATCAGA
GTGAAAAAATCTTCAGCCTGACACCAAATATTGTATACCAGAGAACTAGCACACAAGAAAAGTCATTTGA
ATGTAGTCACTGTGGAAAATCCTTCATTAATGAGTCATACCTTCAGGCACATATGAGAACTCACAATGGA
GAAAAACTCTACGAATGGAGGAATTATGGGCCAGGTTTTATTGACTCTACAAGCCTTTCTGTGCTTATAG
AAACCCTCAATGCAAAAAAGCCCTACAAATGTAAGGAATGTGGAAAAGGCTATAGATACCCAGCCTACCT
CAGTATTCACATGCGAACCCACACTGGGGAGAAACCATATGAATGTAAGGAATGTGGGAAAGCCTTCAAT
TATTCCAACTCATTTCAGATACATGGAAGAACTCACACTGGAGAGAAACCCTATGTATGTAAGGAATGTG
GGAAAGCCTTCACTCAGTACTCGGGCCTTAGTATGCATGTACGATCTCACAGTGGAGACAAGCCCTATGA
ATGTAAGGAATGTGGGAAATCCTTCCTTACATCCTCACGCCTTATTCAACATATAAGAACTCACACTGGA
GAGAAGCCTTTTGTATGTGTTGAATGTGGGAAAGCCTTTGCAGTTTCCTCAAATCTTAGTGGACATTTGA
GAACTCACACTGAAGAGAAGGCCTGTGAGTGTAAGATATGTGGGAAAGTATTTGGGTATCCCTCATGTCT
TAATAATCACATGCGAACGCACAGTGCCCAGAAACCATACACCTGTAAGGAATGTGGGAAGGCTTTTAAC
TATTCCACCCACCTTAAAATTCACATGCGAATCCACACTGGAGAAAAACCCTATGAGTGTAAACAATGTG
GAAAGGCCTTCAGTCATTCCAGTTCATTTCAAATACATGAAAGGACTCACACTGGAGAGAAACCCTATGA
ATGCAAGGAGTGTGGGAAAGCCTTCACGTGTTCCAGTTCCTTTAGAATTCATGAAAAAACTCACACAGAA
GAGAAACCCTATAAATGTCAGCAATGCGGGAAAGCTTACAGTCATCCCCGTTCACTTCGAAGACATGAAC
AAATTCACTAG

Translation (516 aa):
MDSVTFDDVAVDFTQEEWTLLDSTQRSLYSDVMLENYKNLATVGGQIIKPSLISWLEQEESRTVQGGVLQ
GWEMRLETQWSILQQDFLRGQTSIGIQLEGKHNGRELCDCEQCGEVFSEHSCLKTHVRTQSTGNTHDCNQ
YGKDFLTLCEKTSTGEKLSEFNQSEKIFSLTPNIVYQRTSTQEKSFECSHCGKSFINESYLQAHMRTHNG
EKLYEWRNYGPGFIDSTSLSVLIETLNAKKPYKCKECGKGYRYPAYLSIHMRTHTGEKPYECKECGKAFN
YSNSFQIHGRTHTGEKPYVCKECGKAFTQYSGLSMHVRSHSGDKPYECKECGKSFLTSSRLIQHIRTHTG
EKPFVCVECGKAFAVSSNLSGHLRTHTEEKACECKICGKVFGYPSCLNNHMRTHSAQKPYTCKECGKAFN
YSTHLKIHMRIHTGEKPYECKQCGKAFSHSSSFQIHERTHTGEKPYECKECGKAFTCSSSFRIHEKTHTE
EKPYKCQQCGKAYSHPRSLRRHEQIH


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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