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Report for CCDS74614.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74614.1 Public Homo sapiens 2 NUP35 24 110 108 CCDS HistoryNCBI Gene:129401Re-query CCDS DB by CCDS ID:74614.1Re-query CCDS DB by GeneID:129401See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74614.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409798.5 ENSP00000387305.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409798.5Link to Ensembl Protein Viewer:ENSP00000387305.1Re-query CCDS DB by Nucleotide ID:ENST00000409798Re-query CCDS DB by Protein ID:ENSP00000387305
Original member Current member NCBI NM_001287584.2 NP_001274513.1 Accepted alive Link to Nucleotide Sequence:NM_001287584.2Link to Protein Sequence:NP_001274513.1Re-query CCDS DB by Nucleotide ID:NM_001287584Re-query CCDS DB by Protein ID:NP_001274513Link to BLAST:NP_001274513.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001274513.1 309 Q8NFH5-2 309 100% 0 0

Chromosomal Locations for CCDS 74614.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 183128298 183128457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 183130418 183130545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 183133566 183133623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 183151508 183151649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 183157444 183157513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 183158283 183158411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 183159488 183159652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 183161054 183161131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGATGCTGGGTTCACCCACATCTCCAAAGCCAGGAGTTAATGCCCAGTTCTTACCTGGATTTTTAATGG
GGGATTTGCCAGCTCCGGTGACTCCACAACCTCGATCAATTAGTGGCCCTTCAGTAGGAGTAATGGAAAT
GAGATCACCTTTACTTGCAGGTGGGTCACCACCACAACCAGTTGTACCAGCTCATAAAGATAAAAGTGGC
GCTCCACCAGTTAGAAGTATATATGATGACATTTCTAGCCCAGGACTTGGATCAACACCTTTAACTTCAA
GAAGACAGCCAAACATTTCAGTAATGCAGAGTCCTCTTGTTGGAGTTACATCTACTCCTGGAACAGGGCA
AAGTATGTTTAGTCCAGCAAGTATCGGTCAGCCACGAAAGACGACATTATCTCCTGCCCAGTTGGATCCT
TTTTATACTCAAGGAGATTCTTTGACTTCAGAAGATCACCTCGATGACTCTTGGGTGACTGTATTTGGGT
TTCCTCAAGCATCTGCTTCCTACATATTACTACAATTTGCACAGTATGGGAATATCTTAAAACATGTGAT
GTCTAATACAGGAAATTGGATGCATATTCGTTATCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAA
GATGGGAGGATTTTTGGAGAATCCATCATGATTGGTGTAAAACCATGTATTGACAAAAGTGTTATGGAAA
GCAGTGACAGATGTGCTTTATCATCTCCATCTTTAGCCTTTACACCACCAATCAAAACTCTAGGTACACC
AACACAACCTGGAAGTACTCCTAGGATTTCTACCATGAGACCTCTTGCTACAGCATACAAAGCCTCTACT
AGTGATTATCAGGTTATTTCTGACAGACAAACGCCAAAAAAAGATGAAAGTCTTGTATCCAAAGCAATGG
AGTACATGTTTGGCTGGTAG

Translation (309 aa):
MMLGSPTSPKPGVNAQFLPGFLMGDLPAPVTPQPRSISGPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSG
APPVRSIYDDISSPGLGSTPLTSRRQPNISVMQSPLVGVTSTPGTGQSMFSPASIGQPRKTTLSPAQLDP
FYTQGDSLTSEDHLDDSWVTVFGFPQASASYILLQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALSK
DGRIFGESIMIGVKPCIDKSVMESSDRCALSSPSLAFTPPIKTLGTPTQPGSTPRISTMRPLATAYKAST
SDYQVISDRQTPKKDESLVSKAMEYMFGW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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