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Report for CCDS74740.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74740.1 Public Homo sapiens 20 UBE2V1 24 110 108 CCDS HistoryNCBI Gene:7335Re-query CCDS DB by CCDS ID:74740.1Re-query CCDS DB by GeneID:7335See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74740.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000557021.5 ENSP00000450635.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000557021.5Link to Ensembl Protein Viewer:ENSP00000450635.2Re-query CCDS DB by Nucleotide ID:ENST00000557021Re-query CCDS DB by Protein ID:ENSP00000450635
Original member Current member EBI ENST00000617119.4 ENSP00000484828.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617119.4Link to Ensembl Protein Viewer:ENSP00000484828.1Re-query CCDS DB by Nucleotide ID:ENST00000617119Re-query CCDS DB by Protein ID:ENSP00000484828
Original member Current member EBI ENST00000625172.3 ENSP00000485599.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000625172.3Link to Ensembl Protein Viewer:ENSP00000485599.1Re-query CCDS DB by Nucleotide ID:ENST00000625172Re-query CCDS DB by Protein ID:ENSP00000485599
Original member Current member NCBI NM_001257397.2 NP_001244326.1 Accepted alive Link to Nucleotide Sequence:NM_001257397.2Link to Protein Sequence:NP_001244326.1Re-query CCDS DB by Nucleotide ID:NM_001257397Re-query CCDS DB by Protein ID:NP_001244326Link to BLAST:NP_001244326.1
Original member Current member NCBI NM_001257398.2 NP_001244327.1 Accepted alive Link to Nucleotide Sequence:NM_001257398.2Link to Protein Sequence:NP_001244327.1Re-query CCDS DB by Nucleotide ID:NM_001257398Re-query CCDS DB by Protein ID:NP_001244327Link to BLAST:NP_001244327.1
Original member Current member NCBI NM_001257399.2 NP_001244328.1 Accepted alive Link to Nucleotide Sequence:NM_001257399.2Link to Protein Sequence:NP_001244328.1Re-query CCDS DB by Nucleotide ID:NM_001257399Re-query CCDS DB by Protein ID:NP_001244328Link to BLAST:NP_001244328.1
Original member Current member NCBI NM_001282576.2 NP_001269505.1 Accepted alive Link to Nucleotide Sequence:NM_001282576.2Link to Protein Sequence:NP_001269505.1Re-query CCDS DB by Nucleotide ID:NM_001282576Re-query CCDS DB by Protein ID:NP_001269505Link to BLAST:NP_001269505.1
Original member Current member NCBI NM_001282579.2 NP_001269508.1 Accepted alive Link to Nucleotide Sequence:NM_001282579.2Link to Protein Sequence:NP_001269508.1Re-query CCDS DB by Nucleotide ID:NM_001282579Re-query CCDS DB by Protein ID:NP_001269508Link to BLAST:NP_001269508.1

Chromosomal Locations for CCDS 74740.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 50082768 50082914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 50084129 50084254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 50096672 50096716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (318 nt):
ATGACACTTACAAGATGGACAGGGATGATAATTGGGCCTCCAAGAACAATTTATGAAAACCGAATATACA
GCCTTAAAATAGAATGTGGACCTAAATACCCAGAAGCACCCCCCTTTGTAAGATTTGTAACAAAAATTAA
TATGAATGGAGTAAATAGTTCTAATGGAGTGGTGGACCCAAGAGCCATATCAGTGCTAGCAAAATGGCAG
AATTCATATAGCATCAAAGTTGTCCTGCAAGAGCTTCGGCGCCTAATGATGTCTAAAGAAAATATGAAAC
TCCCTCAGCCGCCCGAAGGACAGTGTTACAGCAATTAA

Translation (105 aa):
MTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQ
NSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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