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Report for CCDS7483.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7483.1 Public Homo sapiens 10 CUTC 24 110 108 CCDS HistoryNCBI Gene:51076Re-query CCDS DB by CCDS ID:7483.1Re-query CCDS DB by GeneID:51076See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7483.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370476.10 ENSP00000359507.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370476.10Link to Ensembl Protein Viewer:ENSP00000359507.5Re-query CCDS DB by Nucleotide ID:ENST00000370476Re-query CCDS DB by Protein ID:ENSP00000359507
Original member Current member NCBI NM_015960.3 NP_057044.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015960.3Link to Protein Sequence:NP_057044.2Re-query CCDS DB by Nucleotide ID:NM_015960Re-query CCDS DB by Protein ID:NP_057044Link to BLAST:NP_057044.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057044.2 273 Q9NTM9 273 100% 0 0

Chromosomal Locations for CCDS 7483.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 99732349 99732409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99736246 99736317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99739710 99739769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99743153 99743362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99744037 99744072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99747257 99747390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99750369 99750396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99754529 99754634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99755625 99755739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGAAAAGGCAGGGGGCCTCCTCTGAGCGAAAACGAGCGCGGATACCGTCCGGGAAGGCCGGAGCAGCAA
ATGGATTTCTCATGGAAGTTTGTGTTGATTCAGTGGAATCAGCTGTGAATGCAGAAAGAGGAGGTGCTGA
TCGGATTGAATTATGTTCTGGTTTATCAGAGGGGGGAACTACACCCAGCATGGGTGTCCTTCAAGTAGTG
AAGCAGAGTGTTCAGATCCCAGTTTTTGTGATGATTCGGCCACGGGGAGGTGATTTTTTGTATTCAGATC
GTGAAATTGAGGTGATGAAGGCTGACATTCGTCTTGCCAAGCTTTATGGTGCTGATGGTTTGGTTTTTGG
GGCATTGACTGAAGATGGACACATTGACAAAGAGCTGTGTATGTCCCTTATGGCTATTTGCCGCCCTCTG
CCAGTCACTTTCCACCGAGCCTTTGACATGGTTCATGATCCAATGGCAGCTCTGGAGACCCTCTTAACCT
TGGGATTTGAACGCGTGTTGACCAGTGGATGTGACAGTTCAGCATTAGAAGGGCTACCCCTAATAAAGCG
ACTCATTGAGCAGGCAAAAGGCAGGATTGTGGTAATGCCAGGAGGTGGTATAACAGACAGAAATCTACAA
AGGATCCTTGAGGGTTCAGGTGCTACAGAATTCCACTGTTCTGCTCGGTCTACTAGAGACTCGGGAATGA
AGTTTCGAAATTCATCTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAGA
TGTGACCAAAGTAAGGACTTTGAATGCTATCGCAAAGAACATCCTGGTGTAG

Translation (273 aa):
MKRQGASSERKRARIPSGKAGAANGFLMEVCVDSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVV
KQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPL
PVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQ
RILEGSGATEFHCSARSTRDSGMKFRNSSVAMGASLSCSEYSLKVTDVTKVRTLNAIAKNILV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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