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Report for CCDS75007.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75007.1 Public Homo sapiens 3 ASTE1 24 110 108 CCDS HistoryNCBI Gene:28990Re-query CCDS DB by CCDS ID:75007.1Re-query CCDS DB by GeneID:28990See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75007.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000514044.5 ENSP00000426421.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000514044.5Link to Ensembl Protein Viewer:ENSP00000426421.1Re-query CCDS DB by Nucleotide ID:ENST00000514044Re-query CCDS DB by Protein ID:ENSP00000426421
Original member Current member NCBI NM_001288950.2 NP_001275879.1 Accepted alive Link to Nucleotide Sequence:NM_001288950.2Link to Protein Sequence:NP_001275879.1Re-query CCDS DB by Nucleotide ID:NM_001288950Re-query CCDS DB by Protein ID:NP_001275879Link to BLAST:NP_001275879.1

Chromosomal Locations for CCDS 75007.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 131014057 131014387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131015182 131015256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131016144 131016339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131018506 131018716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131024005 131025306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2115 nt):
ATGGGTATCCGAGGACTAATGAGTTTTGTGGAAGATCATAGTAATGAGTTCTTCACTGATTTGAAGTTGC
GGGACACAAAAATTGTCATTGATGGTTATGCTCTTTTCCACCGTCTTTGCTTCAGTTCAAACTTGGATCT
CCGGTATGGAGGGGACTATGATTCTTTTGCAGATGTTGTACAAAAATTCTTTGAATCACTGTTTGCTTGT
AATATATGCCCATATGTTGTATTAGATGGAGGATGTGACATTTCAGATAAAAAGCTTACAACTTTAAAGG
ATAGAGCTAGAGAGAAGATCCAGATGGCCCATTCCCTTTCTGTTGGTGGGAGTGGGTACGTATGTCCCTT
ACTCATCCGGGAAGTATTCATACAGGTTTTGATCAAGCTGCGGGTGTGTTTTGTCCAGTGCTTTTCAGAA
GCAGATCGGGACATTATGACACTTGCTAACCATTGGAATTGCCCTGTGTTATCATCAGATAGTGACTTTT
GCATTTTTGACCTGAAAACTGGGTTTTGCCCATTGAATAGCTTTCAGTGGAGAAATATGAACACTATTAA
GGGCACACAAAACTATATCCCTGCCAAATGCTTTTCCCTTGATGCATTCTGCCATCACTTCAGCAATATG
AATAAAGCTCTACTACCTCTCTTTGCGGTGCTATGTGGAAATGACCATGTTAATCTACCCATCATGGAGA
CATTCTTAAGTAAAGCGCGTCTTCCTCTTGGAGCTACCAGTTCTAAAGGGAGGAGACACCACCGAATCCT
GGGACTTCTGAATTGGTTGTCTCATTTTGCCAACCCTACCGAAGCACTAGATAATGTTCTGAAATACCTC
CCAAAAAAGGATCGAGAAAATGTTAAGGAACTTCTCTGCTGTTCCATGGAAGAATACCAACAGTCCCAGG
TGAAGCTACAGGACTTCTTCCAGTGTGGTACTTATGTCTGTCCAGATGCCTTGAATCTTGGTTTACCAGA
ATGGGTATTAGTGGCTTTAGCTAAAGGCCAGCTATCTCCTTTCATCAGTGATGCTTTGGTCCTAAGACGG
ACCATTCTTCCCACACAGGTGGAAAACATGCAGCAACCAAATGCCCACAGAATATCTCAGCCCATCAGGC
AAATCATCTATGGGCTTCTTTTAAATGCCTCACCACATCTGGACAAGACATCCTGGAATGCATTGCCTCC
TCAGCCTCTAGCTTTCAGTGAAGTGGAAAGGATTAATAAAAATATCAGAACCTCAATCATTGATGCAGTA
GAACTGGCCAAGGATCATTCTGACTTAAGCAGATTGACTGAGCTCTCCTTGAGGAGGCGGCAGATGCTTC
TGTTAGAAACCCTGAAGGTGAAACAGACCATTCTGGAGCCAATCCCTACTTCACTGAAGTTGCCCATTGC
TGTCAGTTGCTACTGGTTGCAGCACACCGAGACCAAAGCAAAGCTACATCATCTACAATCCTTACTGCTC
ACAATGCTAGTGGGGCCCTTGATTGCCATAATCAACAGCCCTGGTAAGGAAGAGCTGCAGGAAGATGGTG
CTAAGATGTTGTATGCAGAGTTCCAAAGAGTGAAGGCGCAGACACGGCTGGGCACAAGACTGGACTTAGA
CACAGCTCACATCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGATGTATCTCAACCAGCTGCTGTCC
ACTCCTCTCCCAGAGCCAGACCTAACTCGCCCCAGTGCCTTCAATACTTTGAATGAGGATATATGGACGC
ATACAAAATATGGTGGGACTTTACATGTTTCAAGACTGTACAGTGGAAGCCTGGTGCACGGACTATGCCA
GCAACTGCTAGCATCGACCTCTGTAGAAAGTCTCCTGAGCATATGTCCTGAGGCTAAGCAACTTTATGAA
TATCTATTCAATGCCACAAGGTCATATGCCCCCGCTGAAATATTCCTACCAAAAGGTAGATCAAATTCAA
AAAAAAAAAGGCAGAAGAAACAGAATACCAGCTGTTCTAAGAACAGAGGGAGAACCACTGCACACACCAA
GTGTTGGTATGAGGGAAACAACCGGTTTGGGTTGTTAATGGTTGAAAACTTAGAGGAACATAGTGAGGCC
TCCAACATTGAATAA

Translation (704 aa):
MGIRGLMSFVEDHSNEFFTDLKLRDTKIVIDGYALFHRLCFSSNLDLRYGGDYDSFADVVQKFFESLFAC
NICPYVVLDGGCDISDKKLTTLKDRAREKIQMAHSLSVGGSGYVCPLLIREVFIQVLIKLRVCFVQCFSE
ADRDIMTLANHWNCPVLSSDSDFCIFDLKTGFCPLNSFQWRNMNTIKGTQNYIPAKCFSLDAFCHHFSNM
NKALLPLFAVLCGNDHVNLPIMETFLSKARLPLGATSSKGRRHHRILGLLNWLSHFANPTEALDNVLKYL
PKKDRENVKELLCCSMEEYQQSQVKLQDFFQCGTYVCPDALNLGLPEWVLVALAKGQLSPFISDALVLRR
TILPTQVENMQQPNAHRISQPIRQIIYGLLLNASPHLDKTSWNALPPQPLAFSEVERINKNIRTSIIDAV
ELAKDHSDLSRLTELSLRRRQMLLLETLKVKQTILEPIPTSLKLPIAVSCYWLQHTETKAKLHHLQSLLL
TMLVGPLIAIINSPGKEELQEDGAKMLYAEFQRVKAQTRLGTRLDLDTAHIFCQWQSCLQMGMYLNQLLS
TPLPEPDLTRPSAFNTLNEDIWTHTKYGGTLHVSRLYSGSLVHGLCQQLLASTSVESLLSICPEAKQLYE
YLFNATRSYAPAEIFLPKGRSNSKKKRQKKQNTSCSKNRGRTTAHTKCWYEGNNRFGLLMVENLEEHSEA
SNIE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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